7 * Created by Sarah Westcott on 4/9/09.
8 * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
14 class SharedRAbundVector;
15 class SharedOrderVector;
17 /**************************************************************************************************/
24 void getSharedVectors(vector<string>, vector<SharedRAbundVector*>&, SharedOrderVector*);
25 void getSharedVectorswithReplacement(vector<string>, vector<SharedRAbundVector*>&, SharedOrderVector*);
26 void setGroups(vector<string>&, vector<string>&); //globaldata->Groups, your tree or group map
27 void setGroups(vector<string>&, vector<string>&, string); //globaldata->Groups, your tree or group map, mode
28 void setGroups(vector<string>&, vector<string>&, string&, int&, string); //globaldata->Groups, your tree or group map, allgroups, numGroups, mode
29 void getCombos(vector<string>&, vector<string>, int&); //groupcomb, globaldata->Groups, numcomb
30 void updateGroupIndex(vector<string>&, map<string, int>&); //globaldata->Groups, groupmap->groupIndex
34 bool isValidGroup(string, vector<string>);
37 /**************************************************************************************************/