7 * Created by westcott on 10/28/09.
8 * Copyright 2009 Schloss Lab. All rights reserved.
14 #include "nameassignment.hpp"
15 #include "listvector.hpp"
16 #include "counttable.h"
19 /******************************************************/
24 ReadCluster(string, float, string, bool);
26 int read(NameAssignment*&);
27 int read(CountTable*&);
28 string getOutputFile() { return OutPutFile; }
29 void setFormat(string f) { format = f; }
30 ListVector* getListVector() { return list; }
33 string distFile, outputDir;
34 string OutPutFile, format;
40 int convertPhylip2Column(NameAssignment*&);
41 int convertPhylip2Column(CountTable*&);
44 /******************************************************/