neurodebian.cfg

   1 [dde]
   2 pkgquery_url = http://dde.debian.net/dde/q/udd
   3
   4 [packages]
   5 # Packages listed in the following taskfiles will be featured on the website
   6 # _if_ they are also present in the repository
   7 select taskfiles =
   8  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci
   9  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology
  10  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive
  11  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets
  12  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling
  13  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging
  14  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev
  15  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/psychology
  16
  17 # Additional selection filter (similar to 'select taskfiles'), only listing
  18 # package names
  19 select names = libnifti2 odin mitools afni-atlases python-pyssdh python-networkx
  20  r-cran-glmnet python-rpy2 python-nibabel-snapshot
  21  python-scikits-learn python-mdp python-mlpy python-openpyxl libgdf-dev matlab
  22  svgtune
  23
  24 # Information about prospective packages to be imported from taskfiles
  25 prospective =
  26  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci
  27  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology
  28  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive
  29  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets
  30  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling
  31  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging
  32  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev
  33
  34 [blend package aliases]
  35 # alias a package name from a blend taskfile to an arbitray number of additional
  36 # package names -- if the original name should appear in the package list it has
  37 # to be added as an alias as well
  38 mni-icbm152-nlin-2009 = mni-icbm152-nlin-2009a mni-icbm152-nlin-2009b mni-icbm152-nlin-2009c
  39 fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds fsl-mni152-templates
  40 fslview = fslview fslview-doc
  41 python-mvpa = python-mvpa python-mvpa-snapshot
  42 libgiftiio-dev = libgiftiio-dev gifti-bin
  43 openmeeg-tools = openmeeg-tools libopenmeeg-dev python-openmeeg libopenmeeg1
  44 libbiosig-dev = libbiosig-dev python-biosig octave-biosig biosig-tools libbiosig0
  45 libgdf-dev = libgdf-dev libgdf0 libgdf0-dbg libgdf-dev gdf-tools octave-gdf matlab-gdf
  46 spm8 = matlab-spm8 spm8-common spm8-data spm8-doc
  47
  48 [mirrors]
  49 de = http://apsy.gse.uni-magdeburg.de/debian
  50 gr = http://neurobot.bio.auth.gr/neurodebian
  51 us-ca = http://neurodeb.pirsquared.org
  52 us-nh = http://neuro.debian.net/debian
  53 us-tn = http://masi.vuse.vanderbilt.edu/neurodebian
  54
  55 [neurodebian]
  56 # Release files of all repositories to be contained in the website
  57 releases =
  58  http://neuro.debian.net/debian/dists/data/Release
  59  http://neuro.debian.net/debian/dists/dapper/Release
  60  http://neuro.debian.net/debian/dists/gutsy/Release
  61  http://neuro.debian.net/debian/dists/hardy/Release
  62  http://neuro.debian.net/debian/dists/intrepid/Release
  63  http://neuro.debian.net/debian/dists/jaunty/Release
  64  http://neuro.debian.net/debian/dists/karmic/Release
  65  http://neuro.debian.net/debian/dists/lucid/Release
  66  http://neuro.debian.net/debian/dists/maverick/Release
  67  http://neuro.debian.net/debian/dists/etch/Release
  68  http://neuro.debian.net/debian/dists/lenny/Release
  69  http://neuro.debian.net/debian/dists/squeeze/Release
  70  http://neuro.debian.net/debian/dists/sid/Release
  71
  72 [release codenames]
  73 # the 'data' entry should not be changed, as this exact setting also serves as
  74 # a test condition in the DDE code
  75 data = Datasets
  76 etch = Debian GNU/Linux 4.0 (etch)
  77 lenny = Debian GNU/Linux 5.0 (lenny)
  78 squeeze = Debian testing (squeeze)
  79 #squeeze = Debian 6.0 (squeeze)
  80 #wheezy = Debian testing (wheezy)
  81 sid = Debian unstable (sid)
  82 #dapper = Ubuntu 06.06 LTS "Dapper Drake" (dapper)
  83 #edgy = Ubuntu 06.10 "Edgy Eft" (edgy)
  84 #gutsy = Ubuntu 07.10 "Gutsy Gibbon" (gutsy)
  85 hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy)
  86 intrepid = Ubuntu 08.10 "Intrepid Ibex" (intrepid)
  87 jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty)
  88 karmic = Ubuntu 09.10 "Karmic Koala" (karmic)
  89 lucid = Ubuntu 10.04 LTS "Lucid Lynx" (lucid)
  90 maverick = Ubuntu 10.10 "Maverick Meerkat" (maverick)
  91 natty = Upcoming Ubuntu 11.04 "Natty Narwhal" (natty)
  92
  93 [release backport ids]
  94 # the purpose of these ids is to have version suffixes for backported packages
  95 # that allow proper sorting (upgradability) across distribution releases
  96 # For Debian we'll use ndXX (where XX is the version of the Debian release,
  97 # e.g. 50; analog to backports.org) and for Ubuntu we'll use ndXX.XX.
  98 data = nd
  99 etch = nd40
 100 lenny = nd50
 101 squeeze = nd60
 102 wheezy = nd70
 103 sid = nd
 104 hardy = nd08.04
 105 intrepid = nd08.10
 106 jaunty = nd09.04
 107 karmic = nd09.10
 108 lucid = nd10.04
 109 maverick = nd10.10
 110
 111 [nitrc ids]
 112 afni = 23
 113 ants = 130
 114 camino = 253
 115 caret = 34
 116 connectomeviewer = 355
 117 dicomnifti = 218
 118 fsl = 25
 119 fslview = 25
 120 gifti-bin = 75
 121 imagej = 256
 122 itksnap = 110
 123 jist = 228
 124 libminc-dev = 129
 125 libgiftiio-dev = 75
 126 libnifti2 = 26
 127 libnifti-dev = 26
 128 matlab-spm8 = 24
 129 minc-tools = 129
 130 mipav = 70
 131 mitools = 153
 132 mricron = 152
 133 mrtrix = 128
 134 nifti-bin = 26
 135 odin = 153
 136 python-mvpa = 162
 137 python-nipype = 325
 138 slicer = 50
 139 spm8 = 24
 140 voxbo = 73
 141