neurodebian.cfg

   1 [dde]
   2 pkgquery_url = http://dde.debian.net/dde/q/udd
   3
   4 [packages]
   5 # Packages listed in the following taskfiles will be featured on the website
   6 # _if_ they are also present in the repository
   7 select taskfiles =
   8  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci
   9  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology
  10  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive
  11  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets
  12  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling
  13  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics
  14  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging
  15  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev
  16  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/psychology
  17
  18 # Additional selection filter (similar to 'select taskfiles'), only listing
  19 # package names
  20 select names = libnifti2 odin mitools afni-atlases python-pyssdh python-networkx
  21  r-cran-glmnet python-rpy2 python-nibabel-snapshot
  22  python-scikits-learn python-mdp python-mlpy python-openpyxl libgdf-dev matlab-support
  23  svgtune
  24
  25 # Information about prospective packages to be imported from taskfiles
  26 prospective =
  27  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci
  28  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology
  29  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive
  30  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets
  31  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling
  32  svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics
  33  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging
  34  svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev
  35
  36 [blend package aliases]
  37 # alias a package name from a blend taskfile to an arbitray number of additional
  38 # package names -- if the original name should appear in the package list it has
  39 # to be added as an alias as well
  40 mni-icbm152-nlin-2009 = mni-icbm152-nlin-2009a mni-icbm152-nlin-2009b mni-icbm152-nlin-2009c
  41 fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds fsl-mni152-templates
  42 fslview = fslview fslview-doc
  43 python-mvpa = python-mvpa python-mvpa-snapshot
  44 libgiftiio-dev = libgiftiio-dev gifti-bin
  45 openmeeg-tools = openmeeg-tools libopenmeeg-dev python-openmeeg libopenmeeg1
  46 libbiosig-dev = libbiosig-dev python-biosig octave-biosig biosig-tools libbiosig0
  47 libgdf-dev = libgdf-dev libgdf0 libgdf0-dbg libgdf-dev gdf-tools octave-gdf matlab-gdf
  48 spm8 = matlab-spm8 spm8-common spm8-data spm8-doc
  49 libfreenect-dev = libfreenect0.0 libfreenect-dev libfreenect-demos python-freenect freenect
  50
  51 [mirrors]
  52 de = http://apsy.gse.uni-magdeburg.de/debian
  53 gr = http://neurobot.bio.auth.gr/neurodebian
  54 us-ca = http://neurodeb.pirsquared.org
  55 us-nh = http://neuro.debian.net/debian
  56 us-tn = http://masi.vuse.vanderbilt.edu/neurodebian
  57
  58 [neurodebian]
  59 # Release files of all repositories to be contained in the website
  60 releases =
  61  http://neuro.debian.net/debian/dists/data/Release
  62  http://neuro.debian.net/debian/dists/dapper/Release
  63  http://neuro.debian.net/debian/dists/gutsy/Release
  64  http://neuro.debian.net/debian/dists/hardy/Release
  65  http://neuro.debian.net/debian/dists/intrepid/Release
  66  http://neuro.debian.net/debian/dists/jaunty/Release
  67  http://neuro.debian.net/debian/dists/karmic/Release
  68  http://neuro.debian.net/debian/dists/lucid/Release
  69  http://neuro.debian.net/debian/dists/maverick/Release
  70  http://neuro.debian.net/debian/dists/etch/Release
  71  http://neuro.debian.net/debian/dists/lenny/Release
  72  http://neuro.debian.net/debian/dists/squeeze/Release
  73  http://neuro.debian.net/debian/dists/sid/Release
  74
  75 [release codenames]
  76 # the 'data' entry should not be changed, as this exact setting also serves as
  77 # a test condition in the DDE code
  78 data = Datasets
  79 etch = Debian GNU/Linux 4.0 (etch)
  80 lenny = Debian GNU/Linux 5.0 (lenny)
  81 squeeze = Debian testing (squeeze)
  82 #squeeze = Debian 6.0 (squeeze)
  83 #wheezy = Debian testing (wheezy)
  84 sid = Debian unstable (sid)
  85 #dapper = Ubuntu 06.06 LTS "Dapper Drake" (dapper)
  86 #edgy = Ubuntu 06.10 "Edgy Eft" (edgy)
  87 #gutsy = Ubuntu 07.10 "Gutsy Gibbon" (gutsy)
  88 hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy)
  89 intrepid = Ubuntu 08.10 "Intrepid Ibex" (intrepid)
  90 jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty)
  91 karmic = Ubuntu 09.10 "Karmic Koala" (karmic)
  92 lucid = Ubuntu 10.04 LTS "Lucid Lynx" (lucid)
  93 maverick = Ubuntu 10.10 "Maverick Meerkat" (maverick)
  94 natty = Upcoming Ubuntu 11.04 "Natty Narwhal" (natty)
  95
  96 [release backport ids]
  97 # the purpose of these ids is to have version suffixes for backported packages
  98 # that allow proper sorting (upgradability) across distribution releases
  99 # For Debian we'll use ndXX (where XX is the version of the Debian release,
 100 # e.g. 50; analog to backports.org) and for Ubuntu we'll use ndXX.XX.
 101 data = nd
 102 etch = nd40
 103 lenny = nd50
 104 squeeze = nd60
 105 wheezy = nd70
 106 sid = nd
 107 hardy = nd08.04
 108 intrepid = nd08.10
 109 jaunty = nd09.04
 110 karmic = nd09.10
 111 lucid = nd10.04
 112 maverick = nd10.10
 113
 114 [nitrc ids]
 115 afni = 23
 116 ants = 130
 117 camino = 253
 118 caret = 34
 119 connectomeviewer = 355
 120 dicomnifti = 218
 121 fsl = 25
 122 fslview = 25
 123 gifti-bin = 75
 124 imagej = 256
 125 itksnap = 110
 126 jist = 228
 127 libminc-dev = 129
 128 libgiftiio-dev = 75
 129 libnifti2 = 26
 130 libnifti-dev = 26
 131 matlab-spm8 = 24
 132 minc-tools = 129
 133 mipav = 70
 134 mitools = 153
 135 mricron = 152
 136 mrtrix = 128
 137 nifti-bin = 26
 138 odin = 153
 139 python-mvpa = 162
 140 python-nipype = 325
 141 slicer = 50
 142 spm8 = 24
 143 voxbo = 73
 144