debian/patches/cmake_fixup

   1 --- a/src/CMakeLists.txt
   2 +++ b/src/CMakeLists.txt
   3 @@ -6,7 +6,7 @@
   4  # ==========================
   5
   6  add_subdirectory( api )
   7 -add_subdirectory( third_party )
   8 +# add_subdirectory( third_party )
   9  add_subdirectory( toolkit )
  10  add_subdirectory( utils )
  11
  12 --- a/src/third_party/CMakeLists.txt
  13 +++ b/src/third_party/CMakeLists.txt
  14 @@ -6,4 +6,4 @@
  15  # ==========================
  16
  17  # list third-party subdirectories to build in
  18 -add_subdirectory( jsoncpp )
  19 +# add_subdirectory( jsoncpp )
  20 --- a/CMakeLists.txt
  21 +++ b/CMakeLists.txt
  22 @@ -38,6 +38,8 @@
  23  set( EXECUTABLE_OUTPUT_PATH "${CMAKE_SOURCE_DIR}/bin" )
  24  set( LIBRARY_OUTPUT_PATH    "${CMAKE_SOURCE_DIR}/lib" )
  25
  26 +SET(CMAKE_INSTALL_RPATH "/usr/lib/bamtools")
  27 +
  28  # define compiler flags for all code
  29  set( CMAKE_BUILD_TYPE Release )
  30  add_definitions( -Wall -D_FILE_OFFSET_BITS=64 )