1 SEQ_NAME: test_full_length_match_forward
2 SEQ: TCGTATGCCGTCTTCTGCTT
6 ADAPTOR_PAT_LEFT: TCGTATGCCGTCTTCTGCTT
8 SEQ_NAME: test_begin_match_forward
9 SEQ: TCGTATGCCGTCTTCTGCTTactacgt
13 ADAPTOR_PAT_LEFT: TCGTATGCCGTCTTCTGCTT
15 SEQ_NAME: test_middle_match_forward
16 SEQ: actgactgaTCGTATGCCGTCTTCTGCTTactacgt
20 ADAPTOR_PAT_LEFT: TCGTATGCCGTCTTCTGCTT
22 SEQ_NAME: test_end_match_forward
23 SEQ: gactgaTCGTATGCCGTCTTCTGCTT
27 ADAPTOR_PAT_LEFT: TCGTATGCCGTCTTCTGCTT
29 SEQ_NAME: test_full_length_match_forward_rc
30 SEQ: AAGCAGAAGACGGCATACGA
33 SEQ_NAME: test_begin_match_forward_rc
34 SEQ: AAGCAGAAGACGGCATACGAactacgt
37 SEQ_NAME: test_middle_match_forward_rc
38 SEQ: actgactgaAAGCAGAAGACGGCATACGAactacgt
41 SEQ_NAME: test_end_match_forward_rc
42 SEQ: gactgaAAGCAGAAGACGGCATACGA
45 SEQ_NAME: test_full_length_match_reverse
46 SEQ: TGACTACGACTACGACTACT
49 SEQ_NAME: test_begin_match_reverse
50 SEQ: TGACTACGACTACGACTACTactacgt
53 SEQ_NAME: test_middle_match_reverse
54 SEQ: actgactgaTGACTACGACTACGACTACTactacgt
57 SEQ_NAME: test_end_match_reverse
58 SEQ: gactgaTGACTACGACTACGACTACT
61 SEQ_NAME: test_full_length_match_reverse_rc
62 SEQ: AGTAGTCGTAGTCGTAGTCA
65 SEQ_NAME: test_begin_match_reverse_rc
66 SEQ: AGTAGTCGTAGTCGTAGTCAactacgt
69 SEQ_NAME: test_middle_match_reverse_rc
70 SEQ: actgactgaAGTAGTCGTAGTCGTAGTCAactacgt
73 SEQ_NAME: test_end_match_reverse_rc
74 SEQ: gactgaAGTAGTCGTAGTCGTAGTCA
77 SEQ_NAME: test_forward_and_reverse_match
78 SEQ: actgactgaTCGTATGCCGTCTTCTGCTTactacgtactgactgaTGACTACGACTACGACTACTactacgt
82 ADAPTOR_PAT_LEFT: TCGTATGCCGTCTTCTGCTT
84 SEQ_NAME: test_forward_partial_match
85 SEQ: GTCTTCTGCTTactacgtactgactgaTGACTACGACTACGACTACTactacgt
88 SEQ_NAME: test_reverse_partial_match
89 SEQ: actgactgaTCGTATGCCGTCTTCTGCTTactacgtactgactgaTGACTACGAC
93 ADAPTOR_PAT_LEFT: TCGTATGCCGTCTTCTGCTT
95 SEQ_NAME: test_forward_and_reverse_match_with_mismatch
96 SEQ: actgactgaTCGTAccCCGTCTTCTGCTTactacgtactgactgaTGACTACGAggACGACTACTactacgt
99 SEQ_NAME: test_forward_and_reverse_match_with_insertion
100 SEQ: actgactgaTCGTATCGTCTTCTGCTTactacgtactgactgaTGACTACGACCGACTACTactacgt
103 SEQ_NAME: test_forward_and_reverse_match_with_deletion
104 SEQ: actgactgaTCGTATGaaCCGTCTTCTGCTTactacgtactgactgaTGACTACGACTAaaCGACTACTactacgt