3 Package Needs License Other
4 =================================================================================
7 ---------------------------------------------------------------------------------
11 rtiff tiff + gpl added
14 DierckxSpline new version builds
16 StatFingerprints tcltk2 now builds
17 WriteXLS (many) sysreq ignore added
21 gWidgetsWWW Rpad, rebuilt
22 rgrs xclip added alias_run,sysreq
23 scagnostics scagnostics license -- added
24 seewave flac added alias_run,sysreq
25 snpXpert tcltk2 now builds
26 tlnise tlnise license added
27 tsModel tlnise now builds
30 BayesTree added one-line C++ patch
31 HAPim added one-char DESCRIPTION patch
32 MatchIt added one-line patch
33 race remove debian/ from source tarball -- fixed in cran2deb
34 RJaCGH contains zlib, added patch to remove it
35 seqinr contains zlib, added patch to remove it
36 rSymPy small patch for python path
37 svSocket small patch re tcl path
38 rgrs xclip sysreq/force added
39 RLadyBug added patch, now works
47 ---------------------------------------------------------------------------------
48 ADaCGH tilingArray (BioC)
49 DAAGbio limma (BioC ?)
53 Metabonomic PROcess (BioC ?)
55 SNPMaP affxparser, SNPMaP.cdm (BioC)
56 SubpathwayMiner KEGG.db (BioC)
57 gene2pathway KEGG.db (BioC)
58 bayesCGH snapCGH (BioC ?)
59 classGraph Rgraphviz (BioC ?)
60 gcExplorer Rgraphviz (BioC ?)
61 logilasso Rgraphviz (BioC ?)
62 pcalg Rgraphviz (BioC ?)
63 qdg pcalg -> Rgraphviz
64 celsius BioBase (BioC ?)
65 multtest BioBase (BioC ?)
66 hopach BioBase (BioC ?)
67 GExMap multtest (BioC)
68 LMGene multtest (BioC)
70 crosshybDetector marray (disappread ?)
72 mpm geneplotter (BioC ?)
73 sisus annotate, Biobase (BioC ?)
76 ---------------------------------------------------------------------------------------------
78 AIGIS gpclib non-commercial
79 RSurvey gpclib non-commercial
83 DSpat spatstat -> gpclib non-commercial
84 SGCS spatstat -> gpclib
85 arrayMissPattern spatstat -> gpclib
86 ecespa spatstat -> gpclib
87 spatclus spatstat -> gpclib
89 gmvalid CoCo not-for-profit
90 ConCalendar non-commercial
102 mapproj non-commercial
103 Geneland mapproj non-commercial
105 SDDA non-commercial CSIRO license
106 optmatch non-commercial
107 SpectralGEM optmatch non-commercial
108 realized non-commercial
109 asypow acm non-commercial
110 caMassClass non-commercial
111 mapproj non-commercial
113 rngwell19937 non-commercial
114 spatialkernel gpc library in non-commercial
118 ----------------------------------------------------------------------------------------------
119 CarbonEL Mac OS X only
120 ROracle requires Oracle libs
121 RScaLAPAPCK licese is free MPI, Blacs, ScaLAPACK, ...
125 VhayuR Vhauy required
126 gputools nvcc (>= 2.1)
127 klar svmlight (non-commercial)
128 rimage C++ needs g++ 4.* update
129 sabreR contains binary, lintian override ?
135 ---------------------------------------------------------------------------------
136 aroma.apd requires aroma.light from BioC
137 aroma.core requires aroma.light from BioC
138 IDPmisc broken R file (!!)
139 Rsymphony build bombs, patch ?, Debian build exists
140 SuppDists build bombs, DESCRIPTION needs space, patch added
141 cmprskContin fortan95 compiler wants memory model
142 mvgraph statDA ? need pkg-config ?