3 Package Needs License Other
4 =================================================================================
7 ---------------------------------------------------------------------------------
11 rtiff tiff + gpl added
14 DierckxSpline new version builds
16 StatFingerprints tcltk2 now builds
17 WriteXLS (many) sysreq ignore added
21 gWidgetsWWW Rpad, rebuilt
22 rgrs xclip added alias_run,sysreq
23 scagnostics scagnostics license -- added
24 seewave flac added alias_run,sysreq
25 snpXpert tcltk2 now builds
26 tlnise tlnise license added
27 tsModel tlnise now builds
28 SuppDists build bombs, DESCRIPTION needs space, patch added
31 BayesTree added one-line C++ patch
32 HAPim added one-char DESCRIPTION patch
33 MatchIt added one-line patch
34 race remove debian/ from source tarball -- fixed in cran2deb
35 RJaCGH contains zlib, added patch to remove it
36 seqinr contains zlib, added patch to remove it
37 rSymPy small patch for python path
38 svSocket small patch re tcl path
41 ---------------------------------------------------------------------------------
42 ADaCGH tilingArray (BioC)
43 DAAGbio limma (BioC ?)
47 Metabonomic PROcess (BioC ?)
49 RLadyBug added small patch, still fails ??
50 Rsymphony build bombs, patch ?, Debian build exists
51 SNPMaP affxparser, SNPMaP.cdm (BioC)
52 SubpathwayMiner KEGG.db (BioC)
53 gene2pathway KEGG.db (BioC)
54 TSpadi build bombs on i386 but not amd64, wild linking ?
57 bayesCGH snapCGH (BioC ?)
58 classGraoh Rgraphviz (BioC ?)
59 gcExplorer Rgraphviz (BioC ?)
60 logilasso Rgraphviz (BioC ?)
61 pcalg Rgraphviz (BioC ?)
62 qdg pcalg -> Rgraphviz
63 celsius BioBase (BioC ?)
64 multtest BioBase (BioC ?)
65 hopach BioBase (BioC ?)
66 multtest BioBase (BioC ?)
67 GExMap multtest (BioC)
68 LMGene multtest (BioC)
69 crosshybDetector marray (disappread ?)
70 fPortfolio RSymphony (which will be in Debian)
72 mpm geneplotter (BioC ?)
74 sabreR contains binary, lintian override ?
75 sgeostat license ? package `5gone ?
76 sisus annotate, Biobase (BioC ?)
77 dlmap empty DESCRIPTION, added patch, still fails ?
80 ---------------------------------------------------------------------------------------------
82 AIGIS gpclib non-commercial
83 RSurvey gpclib non-commercial
87 DSpat spatstat -> gpclib non-commercial
88 SGCS spatstat -> gpclib
89 arrayMissPattern spatstat -> gpclib
90 ecespa spatstat -> gpclib
91 spatclus spatstat -> gpclib
93 gmvalid CoCo not-for-profit
94 ConCalendar non-commercial
106 mapproj non-commercial
107 Geneland mapproj non-commercial
109 SDDA non-commercial CSIRO license
110 optmatch non-commercial
111 SpectralGEM optmatch non-commercial
112 realized non-commercial
113 asypow acm non-commercial
114 caMassClass non-commercial
115 mapproj non-commercial
117 rngwell19937 non-commercial
118 spatialkernel gpc library in non-commercial
121 ----------------------------------------------------------------------------------------------
122 CarbonEL Mac OS X only
123 ROracle requires Oracle libs
124 RScaLAPAPCK licese is free MPI, Blacs, ScaLAPACK, ...
128 VhayuR Vhauy required
129 gputools nvcc (>= 2.1)
130 klar svmlight (non-commercial)
132 rimage C++ needs g++ 4.* update