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566 A7DA207A113FECD400BF472F /* heatmapsim.cpp */,
567 A7DA207B113FECD400BF472F /* heatmapsim.h */,
568 A7DA2081113FECD400BF472F /* inputdata.cpp */,
569 A7DA2082113FECD400BF472F /* inputdata.h */,
570 A7DA208B113FECD400BF472F /* libshuff.cpp */,
571 A7DA208C113FECD400BF472F /* libshuff.h */,
572 A7F6C8DC1242299300299875 /* metastatsource */,
573 A7DA209E113FECD400BF472F /* mothur.cpp */,
574 A7DA209F113FECD400BF472F /* mothur.h */,
575 A7DA20A0113FECD400BF472F /* mothurout.cpp */,
576 A7DA20A1113FECD400BF472F /* mothurout.h */,
577 A7DA20A4113FECD400BF472F /* nast.cpp */,
578 A7DA20A5113FECD400BF472F /* nast.hpp */,
579 A7DA20A6113FECD400BF472F /* nastreport.cpp */,
580 A7DA20A7113FECD400BF472F /* nastreport.hpp */,
581 A7DA20A8113FECD400BF472F /* needlemanoverlap.cpp */,
582 A7DA20A9113FECD400BF472F /* needlemanoverlap.hpp */,
583 A7DA20AA113FECD400BF472F /* noalign.cpp */,
584 A7DA20AB113FECD400BF472F /* noalign.hpp */,
585 A7DA20B1113FECD400BF472F /* observable.h */,
586 A7DA20B4113FECD400BF472F /* optionparser.cpp */,
587 A7DA20B5113FECD400BF472F /* optionparser.h */,
588 A7DA20BA113FECD400BF472F /* overlap.cpp */,
589 A7DA20BB113FECD400BF472F /* overlap.hpp */,
590 A7DA20CC113FECD400BF472F /* progress.cpp */,
591 A7DA20CD113FECD400BF472F /* progress.hpp */,
592 A7DA20D4113FECD400BF472F /* rarecalc.cpp */,
593 A7DA20D5113FECD400BF472F /* rarecalc.h */,
594 A7DA20D6113FECD400BF472F /* raredisplay.cpp */,
595 A7DA20D7113FECD400BF472F /* raredisplay.h */,
596 A7DA20D8113FECD400BF472F /* rarefact.cpp */,
597 A7DA20D9113FECD400BF472F /* rarefact.h */,
598 A7DA20DC113FECD400BF472F /* rarefactioncurvedata.h */,
599 A7CB5953114033220010EB83 /* read */,
600 A7DA213E113FECD400BF472F /* sharedutilities.cpp */,
601 A7DA213F113FECD400BF472F /* sharedutilities.h */,
602 A7DA2144113FECD400BF472F /* singlelinkage.cpp */,
603 A7DA2147113FECD400BF472F /* slibshuff.cpp */,
604 A7DA2148113FECD400BF472F /* slibshuff.h */,
605 A7DA2171113FECD400BF472F /* validcalculator.cpp */,
606 A7DA2172113FECD400BF472F /* validcalculator.h */,
607 A7DA2173113FECD400BF472F /* validparameter.cpp */,
608 A7DA2174113FECD400BF472F /* validparameter.h */,
609 A7DA2175113FECD400BF472F /* venn.cpp */,
610 A7DA2176113FECD400BF472F /* venn.h */,
613 sourceTree = "<group>";
615 A7CB593B11402EF90010EB83 /* calculators */ = {
618 A7DA200B113FECD400BF472F /* calculator.cpp */,
619 A7DA200C113FECD400BF472F /* calculator.h */,
620 A7DA1FED113FECD400BF472F /* ace.h */,
621 A7DA1FEC113FECD400BF472F /* ace.cpp */,
622 A7DA1FFB113FECD400BF472F /* bergerparker.cpp */,
623 A7DA1FFC113FECD400BF472F /* bergerparker.h */,
624 A7DA2003113FECD400BF472F /* boneh.cpp */,
625 A7DA2004113FECD400BF472F /* boneh.h */,
626 A7DA2005113FECD400BF472F /* bootstrap.cpp */,
627 A7DA2006113FECD400BF472F /* bootstrap.h */,
628 A7DA2009113FECD400BF472F /* bstick.cpp */,
629 A7DA200A113FECD400BF472F /* bstick.h */,
630 A7DA200F113FECD400BF472F /* chao1.cpp */,
631 A7DA2010113FECD400BF472F /* chao1.h */,
632 A7DA2033113FECD400BF472F /* coverage.cpp */,
633 A7DA2034113FECD400BF472F /* coverage.h */,
634 A7DA203D113FECD400BF472F /* dist.h */,
635 A7DA2044113FECD400BF472F /* eachgapdist.h */,
636 A7DA2045113FECD400BF472F /* eachgapignore.h */,
637 A7DA2046113FECD400BF472F /* efron.cpp */,
638 A7DA2047113FECD400BF472F /* efron.h */,
639 A7DA204E113FECD400BF472F /* filters.h */,
640 A7DA2058113FECD400BF472F /* geom.cpp */,
641 A7DA2059113FECD400BF472F /* geom.h */,
642 A7DA206C113FECD400BF472F /* goodscoverage.cpp */,
643 A7DA206D113FECD400BF472F /* goodscoverage.h */,
644 7E5B2917121FF53C0005339C /* heip.h */,
645 7E5B2918121FF53C0005339C /* heip.cpp */,
646 A7DA2080113FECD400BF472F /* ignoregaps.h */,
647 7E962A40121F76B1007464B5 /* invsimpson.h */,
648 7E962A41121F76B1007464B5 /* invsimpson.cpp */,
649 A7DA2083113FECD400BF472F /* jackknife.cpp */,
650 A7DA2084113FECD400BF472F /* jackknife.h */,
651 A7DA2093113FECD400BF472F /* logsd.cpp */,
652 A7DA2094113FECD400BF472F /* logsd.h */,
653 A7DA20AE113FECD400BF472F /* npshannon.cpp */,
654 A7DA20AF113FECD400BF472F /* npshannon.h */,
655 A7DA20B0113FECD400BF472F /* nseqs.h */,
656 A7DA20B2113FECD400BF472F /* onegapdist.h */,
657 A7DA20B3113FECD400BF472F /* onegapignore.h */,
658 A72B3A7B118B4D1B004B9F8D /* phylodiversity.h */,
659 A72B3A7C118B4D1B004B9F8D /* phylodiversity.cpp */,
660 A7DA20BE113FECD400BF472F /* parsimony.cpp */,
661 A7DA20BF113FECD400BF472F /* parsimony.h */,
662 A7DA20CE113FECD400BF472F /* qstat.cpp */,
663 A7DA20CF113FECD400BF472F /* qstat.h */,
664 A7DA2104113FECD400BF472F /* shannon.cpp */,
665 A7DA2105113FECD400BF472F /* shannon.h */,
666 7E5B28DC121FEFCC0005339C /* shannoneven.h */,
667 7E5B28DD121FEFCC0005339C /* shannoneven.cpp */,
668 A7DA2106113FECD400BF472F /* sharedace.cpp */,
669 A7DA2107113FECD400BF472F /* sharedace.h */,
670 A7DA2108113FECD400BF472F /* sharedanderberg.h */,
671 A7DA2109113FECD400BF472F /* sharedanderbergs.cpp */,
672 A7DA210A113FECD400BF472F /* sharedanderbergs.h */,
673 A7DA210B113FECD400BF472F /* sharedbraycurtis.cpp */,
674 A7DA210C113FECD400BF472F /* sharedbraycurtis.h */,
675 A7DA210D113FECD400BF472F /* sharedchao1.cpp */,
676 A7DA210E113FECD400BF472F /* sharedchao1.h */,
677 A7DA2111113FECD400BF472F /* sharedjabund.cpp */,
678 A7DA2112113FECD400BF472F /* sharedjabund.h */,
679 A7DA2113113FECD400BF472F /* sharedjackknife.cpp */,
680 A7DA2114113FECD400BF472F /* sharedjackknife.h */,
681 A7DA2115113FECD400BF472F /* sharedjclass.cpp */,
682 A7DA2116113FECD400BF472F /* sharedjclass.h */,
683 A7DA2117113FECD400BF472F /* sharedjest.cpp */,
684 A7DA2118113FECD400BF472F /* sharedjest.h */,
685 A7DA2119113FECD400BF472F /* sharedkstest.cpp */,
686 A7DA211A113FECD400BF472F /* sharedkstest.h */,
687 A7DA211B113FECD400BF472F /* sharedkulczynski.cpp */,
688 A7DA211C113FECD400BF472F /* sharedkulczynski.h */,
689 A7DA211D113FECD400BF472F /* sharedkulczynskicody.cpp */,
690 A7DA211E113FECD400BF472F /* sharedkulczynskicody.h */,
691 A7DA211F113FECD400BF472F /* sharedlennon.cpp */,
692 A7DA2120113FECD400BF472F /* sharedlennon.h */,
693 A7DA2123113FECD400BF472F /* sharedmarczewski.cpp */,
694 A7DA2124113FECD400BF472F /* sharedmarczewski.h */,
695 A7DA2125113FECD400BF472F /* sharedmorisitahorn.cpp */,
696 A7DA2126113FECD400BF472F /* sharedmorisitahorn.h */,
697 A7DA2127113FECD400BF472F /* sharednseqs.h */,
698 A7DA2128113FECD400BF472F /* sharedochiai.cpp */,
699 A7DA2129113FECD400BF472F /* sharedochiai.h */,
700 A7DA2130113FECD400BF472F /* sharedsobs.cpp */,
701 A7DA2131113FECD400BF472F /* sharedsobs.h */,
702 A7DA2132113FECD400BF472F /* sharedsobscollectsummary.cpp */,
703 A7DA2133113FECD400BF472F /* sharedsobscollectsummary.h */,
704 A7DA2134113FECD400BF472F /* sharedsorabund.cpp */,
705 A7DA2135113FECD400BF472F /* sharedsorabund.h */,
706 A7DA2136113FECD400BF472F /* sharedsorclass.cpp */,
707 A7DA2137113FECD400BF472F /* sharedsorclass.h */,
708 A7DA2138113FECD400BF472F /* sharedsorest.cpp */,
709 A7DA2139113FECD400BF472F /* sharedsorest.h */,
710 A7DA213A113FECD400BF472F /* sharedthetan.cpp */,
711 A7DA213B113FECD400BF472F /* sharedthetan.h */,
712 A7DA213C113FECD400BF472F /* sharedthetayc.cpp */,
713 A7DA213D113FECD400BF472F /* sharedthetayc.h */,
714 A7DA2140113FECD400BF472F /* shen.cpp */,
715 A7DA2141113FECD400BF472F /* shen.h */,
716 7E4EBD43122018FB00D85E7B /* simpsoneven.h */,
717 7E4EBD44122018FB00D85E7B /* simpsoneven.cpp */,
718 7E5B294A121FFADC0005339C /* smithwilson.h */,
719 7E5B294B121FFADC0005339C /* smithwilson.cpp */,
720 A7DA2142113FECD400BF472F /* simpson.cpp */,
721 A7DA2143113FECD400BF472F /* simpson.h */,
722 A7DA2149113FECD400BF472F /* sobs.h */,
723 A7DA214A113FECD400BF472F /* solow.cpp */,
724 A7DA214B113FECD400BF472F /* solow.h */,
725 A7DA2160113FECD400BF472F /* treecalculator.h */,
726 A7DA216D113FECD400BF472F /* unweighted.cpp */,
727 A7DA216E113FECD400BF472F /* unweighted.h */,
728 A7DA216F113FECD400BF472F /* uvest.cpp */,
729 A7DA2170113FECD400BF472F /* uvest.h */,
730 A7DA2179113FECD400BF472F /* weighted.cpp */,
731 A7DA217A113FECD400BF472F /* weighted.h */,
732 7EC61A0911BEA6AF00F668D9 /* weightedlinkage.cpp */,
733 A7DA217B113FECD400BF472F /* whittaker.cpp */,
734 A7DA217C113FECD400BF472F /* whittaker.h */,
737 sourceTree = "<group>";
739 A7CB593E11402F110010EB83 /* commands */ = {
742 A7DA202B113FECD400BF472F /* command.hpp */,
743 A7DA1FEF113FECD400BF472F /* aligncommand.h */,
744 A7DA1FEE113FECD400BF472F /* aligncommand.cpp */,
745 A7DA1FFE113FECD400BF472F /* binsequencecommand.h */,
746 A7DA1FFD113FECD400BF472F /* binsequencecommand.cpp */,
747 A7DA2008113FECD400BF472F /* bootstrapsharedcommand.h */,
748 A7DA2007113FECD400BF472F /* bootstrapsharedcommand.cpp */,
749 A7D216061199C47F00F13F13 /* catchallcommand.h */,
750 A7D216071199C47F00F13F13 /* catchallcommand.cpp */,
751 A7DA2018113FECD400BF472F /* chimeraseqscommand.h */,
752 A7DA2017113FECD400BF472F /* chimeraseqscommand.cpp */,
753 A7825502116519F70002E2DD /* chimerabellerophoncommand.h */,
754 A7825503116519F70002E2DD /* chimerabellerophoncommand.cpp */,
755 A747E79B1163442A00FB9042 /* chimeracheckcommand.h */,
756 A747E79C1163442A00FB9042 /* chimeracheckcommand.cpp */,
757 A78434881162224F00100BE0 /* chimeraccodecommand.h */,
758 A78434891162224F00100BE0 /* chimeraccodecommand.cpp */,
759 A78254461164D7790002E2DD /* chimerapintailcommand.h */,
760 A78254471164D7790002E2DD /* chimerapintailcommand.cpp */,
761 A747E81C116365E000FB9042 /* chimeraslayercommand.h */,
762 A747E81D116365E000FB9042 /* chimeraslayercommand.cpp */,
763 A73953DA11987ED100B0B160 /* chopseqscommand.h */,
764 A73953DB11987ED100B0B160 /* chopseqscommand.cpp */,
765 A7DA201E113FECD400BF472F /* classifyseqscommand.h */,
766 A7DA201D113FECD400BF472F /* classifyseqscommand.cpp */,
767 A7BBDA7B11B5694E006E6551 /* classifyotucommand.h */,
768 A7BBDA7C11B5694E006E6551 /* classifyotucommand.cpp */,
769 A7D215C811996C6E00F13F13 /* clearcutcommand.h */,
770 A7D215C911996C6E00F13F13 /* clearcutcommand.cpp */,
771 A7DA2022113FECD400BF472F /* clustercommand.h */,
772 A7DA2021113FECD400BF472F /* clustercommand.cpp */,
773 A7653D111278B09C009D6C09 /* clusterdoturcommand.h */,
774 A7653D121278B09C009D6C09 /* clusterdoturcommand.cpp */,
775 A74A9C03124B72DB000D5D25 /* clusterfragmentscommand.h */,
776 A74A9C04124B72DB000D5D25 /* clusterfragmentscommand.cpp */,
777 A71D924311AEB42400D00CBC /* clustersplitcommand.h */,
778 A71D924211AEB42400D00CBC /* clustersplitcommand.cpp */,
779 A7DA2026113FECD400BF472F /* collectcommand.h */,
780 A7DA2025113FECD400BF472F /* collectcommand.cpp */,
781 A7DA202A113FECD400BF472F /* collectsharedcommand.h */,
782 A7DA2029113FECD400BF472F /* collectsharedcommand.cpp */,
783 A7DA2032113FECD400BF472F /* consensuscommand.h */,
784 A7DA2031113FECD400BF472F /* consensuscommand.cpp */,
785 A7118EE511CFCAC000CFDE03 /* degapseqscommand.h */,
786 A7118EE611CFCAC000CFDE03 /* degapseqscommand.cpp */,
787 A7DA203B113FECD400BF472F /* deconvolutecommand.h */,
788 A7DA203A113FECD400BF472F /* deconvolutecommand.cpp */,
789 A7DA203F113FECD400BF472F /* distancecommand.h */,
790 A7DA203E113FECD400BF472F /* distancecommand.cpp */,
791 A76714DD126DE45A003F359A /* deuniqueseqscommand.h */,
792 A76714DE126DE45A003F359A /* deuniqueseqscommand.cpp */,
793 A7DA2050113FECD400BF472F /* filterseqscommand.h */,
794 A7DA204F113FECD400BF472F /* filterseqscommand.cpp */,
795 A7DA205B113FECD400BF472F /* getgroupcommand.h */,
796 A7DA205A113FECD400BF472F /* getgroupcommand.cpp */,
797 A7DA205D113FECD400BF472F /* getlabelcommand.h */,
798 A7DA205C113FECD400BF472F /* getlabelcommand.cpp */,
799 A787A24F124CB46C0076EB84 /* getlineagecommand.h */,
800 A787A250124CB46C0076EB84 /* getlineagecommand.cpp */,
801 A7DA205F113FECD400BF472F /* getlistcountcommand.h */,
802 A7DA205E113FECD400BF472F /* getlistcountcommand.cpp */,
803 A7DA2061113FECD400BF472F /* getoturepcommand.h */,
804 A7DA2060113FECD400BF472F /* getoturepcommand.cpp */,
805 A7DA2063113FECD400BF472F /* getrabundcommand.h */,
806 A7DA2062113FECD400BF472F /* getrabundcommand.cpp */,
807 A7118F0F11CFD5DC00CFDE03 /* getrelabundcommand.h */,
808 A7118F1011CFD5DC00CFDE03 /* getrelabundcommand.cpp */,
809 A7DA2065113FECD400BF472F /* getsabundcommand.h */,
810 A7DA2064113FECD400BF472F /* getsabundcommand.cpp */,
811 A7DA2067113FECD400BF472F /* getseqscommand.h */,
812 A7DA2066113FECD400BF472F /* getseqscommand.cpp */,
813 A7DA2069113FECD400BF472F /* getsharedotucommand.h */,
814 A7DA2068113FECD400BF472F /* getsharedotucommand.cpp */,
815 A7DA2075113FECD400BF472F /* hclustercommand.h */,
816 A7DA2074113FECD400BF472F /* hclustercommand.cpp */,
817 A7DA2079113FECD400BF472F /* heatmapcommand.h */,
818 A7DA2078113FECD400BF472F /* heatmapcommand.cpp */,
819 A7DA207D113FECD400BF472F /* heatmapsimcommand.h */,
820 A7DA207C113FECD400BF472F /* heatmapsimcommand.cpp */,
821 A7DA207F113FECD400BF472F /* helpcommand.h */,
822 A7DA207E113FECD400BF472F /* helpcommand.cpp */,
823 A7DA208E113FECD400BF472F /* libshuffcommand.h */,
824 A7DA208D113FECD400BF472F /* libshuffcommand.cpp */,
825 A7DA2090113FECD400BF472F /* listseqscommand.h */,
826 A7DA208F113FECD400BF472F /* listseqscommand.cpp */,
827 A703FE931194645F002C397E /* makegroupcommand.h */,
828 A703FE941194645F002C397E /* makegroupcommand.cpp */,
829 A7DA2099113FECD400BF472F /* matrixoutputcommand.h */,
830 A7DA2098113FECD400BF472F /* matrixoutputcommand.cpp */,
831 A7DA209B113FECD400BF472F /* mergefilecommand.h */,
832 A7DA209A113FECD400BF472F /* mergefilecommand.cpp */,
833 A7F6C8EA12423C0300299875 /* metastatscommand.h */,
834 A7F6C8EB12423C0300299875 /* metastatscommand.cpp */,
835 A7DA209D113FECD400BF472F /* mgclustercommand.h */,
836 A7DA209C113FECD400BF472F /* mgclustercommand.cpp */,
837 A7DA20AD113FECD400BF472F /* nocommands.h */,
838 A7DA20AC113FECD400BF472F /* nocommands.cpp */,
839 A798626D1240D91B005FC847 /* normalizesharedcommand.h */,
840 A798626E1240D91B005FC847 /* normalizesharedcommand.cpp */,
841 A7DA20B9113FECD400BF472F /* otuhierarchycommand.h */,
842 A7DA20B8113FECD400BF472F /* otuhierarchycommand.cpp */,
843 A77D787B126F387700F351BD /* pairwiseseqscommand.h */,
844 A77D787C126F387700F351BD /* pairwiseseqscommand.cpp */,
845 A724C2B61254961E006BB1C7 /* parsefastaqcommand.h */,
846 A724C2B71254961E006BB1C7 /* parsefastaqcommand.cpp */,
847 A7DA20BD113FECD400BF472F /* parselistscommand.h */,
848 A7DA20BC113FECD400BF472F /* parselistscommand.cpp */,
849 A7E8338C115BBDAA00739EC4 /* parsesffcommand.h */,
850 A7E8338B115BBDAA00739EC4 /* parsesffcommand.cpp */,
851 A7DA20C1113FECD400BF472F /* parsimonycommand.h */,
852 A7DA20C0113FECD400BF472F /* parsimonycommand.cpp */,
853 A7DA20C3113FECD400BF472F /* pcacommand.h */,
854 A7DA20C2113FECD400BF472F /* pcacommand.cpp */,
855 A72B3A62118B37FD004B9F8D /* phylodiversitycommand.h */,
856 A72B3A63118B37FD004B9F8D /* phylodiversitycommand.cpp */,
857 A7DA20C7113FECD400BF472F /* phylotypecommand.h */,
858 A7DA20C6113FECD400BF472F /* phylotypecommand.cpp */,
859 A72C66A1125B356F0058C2F9 /* pipelinepdscommand.h */,
860 A72C66A2125B356F0058C2F9 /* pipelinepdscommand.cpp */,
861 A7DA20CB113FECD400BF472F /* preclustercommand.h */,
862 A7DA20CA113FECD400BF472F /* preclustercommand.cpp */,
863 A7DA20D1113FECD400BF472F /* quitcommand.h */,
864 A7DA20D0113FECD400BF472F /* quitcommand.cpp */,
865 A7DA20DB113FECD400BF472F /* rarefactcommand.h */,
866 A7DA20DA113FECD400BF472F /* rarefactcommand.cpp */,
867 A7DA20DE113FECD400BF472F /* rarefactsharedcommand.h */,
868 A7DA20DD113FECD400BF472F /* rarefactsharedcommand.cpp */,
869 A7DA20E6113FECD400BF472F /* readdistcommand.h */,
870 A7DA20E5113FECD400BF472F /* readdistcommand.cpp */,
871 A7DA20EB113FECD400BF472F /* readotucommand.h */,
872 A7DA20EA113FECD400BF472F /* readotucommand.cpp */,
873 A7DA20F1113FECD400BF472F /* readtreecommand.h */,
874 A7DA20F0113FECD400BF472F /* readtreecommand.cpp */,
875 A787A28E124CE1470076EB84 /* removelineagecommand.h */,
876 A787A28F124CE1470076EB84 /* removelineagecommand.cpp */,
877 A7DA20F3113FECD400BF472F /* removeseqscommand.h */,
878 A7DA20F2113FECD400BF472F /* removeseqscommand.cpp */,
879 A7DA20F5113FECD400BF472F /* reversecommand.h */,
880 A7DA20F4113FECD400BF472F /* reversecommand.cpp */,
881 A7DA20F9113FECD400BF472F /* screenseqscommand.h */,
882 A7DA20F8113FECD400BF472F /* screenseqscommand.cpp */,
883 A7DA20FB113FECD400BF472F /* secondarystructurecommand.h */,
884 A7DA20FA113FECD400BF472F /* secondarystructurecommand.cpp */,
885 7EA299BA11E384940022D8D3 /* sensspeccommand.h */,
886 7EA299BB11E384940022D8D3 /* sensspeccommand.cpp */,
887 7E84528511EF4BEB00564975 /* seqerrorcommand.h */,
888 7E84528611EF4BEB00564975 /* seqerrorcommand.cpp */,
889 A7DA20FD113FECD400BF472F /* seqsummarycommand.h */,
890 A7DA20FC113FECD400BF472F /* seqsummarycommand.cpp */,
891 A7DA2103113FECD400BF472F /* setdircommand.h */,
892 A7DA2102113FECD400BF472F /* setdircommand.cpp */,
893 A76C4A1011876BAF0009460B /* setlogfilecommand.h */,
894 A76C4A1111876BAF0009460B /* setlogfilecommand.cpp */,
895 A732505E11E49EF100484B90 /* sffinfocommand.h */,
896 A732505F11E49EF100484B90 /* sffinfocommand.cpp */,
897 A7DA2110113FECD400BF472F /* sharedcommand.h */,
898 A7DA210F113FECD400BF472F /* sharedcommand.cpp */,
899 A71D924511AEB42400D00CBC /* splitabundcommand.h */,
900 A71D924411AEB42400D00CBC /* splitabundcommand.cpp */,
901 A7F139481247C3CB0033324C /* splitgroupscommand.h */,
902 A7F139491247C3CB0033324C /* splitgroupscommand.cpp */,
903 A7653CB112789EFD009D6C09 /* subsamplecommand.h */,
904 A7653CB212789EFD009D6C09 /* subsamplecommand.cpp */,
905 A7DA2155113FECD400BF472F /* summarycommand.h */,
906 A7DA2154113FECD400BF472F /* summarycommand.cpp */,
907 A7DA2159113FECD400BF472F /* summarysharedcommand.h */,
908 A7DA2158113FECD400BF472F /* summarysharedcommand.cpp */,
909 A7DA215B113FECD400BF472F /* systemcommand.h */,
910 A7DA215A113FECD400BF472F /* systemcommand.cpp */,
911 A7DA2162113FECD400BF472F /* treegroupscommand.h */,
912 A7DA2161113FECD400BF472F /* treegroupscommand.cpp */,
913 A7DA2168113FECD400BF472F /* trimseqscommand.h */,
914 A7DA2167113FECD400BF472F /* trimseqscommand.cpp */,
915 A7DA216A113FECD400BF472F /* unifracunweightedcommand.h */,
916 A7DA2169113FECD400BF472F /* unifracunweightedcommand.cpp */,
917 A7DA216C113FECD400BF472F /* unifracweightedcommand.h */,
918 A7DA216B113FECD400BF472F /* unifracweightedcommand.cpp */,
919 A7DA2178113FECD400BF472F /* venncommand.h */,
920 A7DA2177113FECD400BF472F /* venncommand.cpp */,
923 sourceTree = "<group>";
925 A7CB594211402F430010EB83 /* containers */ = {
928 A7DA1FF3113FECD400BF472F /* alignmentcell.hpp */,
929 A7DA1FF2113FECD400BF472F /* alignmentcell.cpp */,
930 A7DA1FF4113FECD400BF472F /* alignmentdb.cpp */,
931 A7DA1FF5113FECD400BF472F /* alignmentdb.h */,
932 A7DA2001113FECD400BF472F /* blastdb.cpp */,
933 A7DA2002113FECD400BF472F /* blastdb.hpp */,
934 A7DA2035113FECD400BF472F /* database.cpp */,
935 A7DA2036113FECD400BF472F /* database.hpp */,
936 A7DA2037113FECD400BF472F /* datavector.hpp */,
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950 A7DA2092113FECD400BF472F /* listvector.hpp */,
951 A7DA20A2113FECD400BF472F /* nameassignment.cpp */,
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953 A7DA20B6113FECD400BF472F /* ordervector.cpp */,
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967 A7DA212A113FECD400BF472F /* sharedordervector.cpp */,
968 A7DA212B113FECD400BF472F /* sharedordervector.h */,
969 A7DA212C113FECD400BF472F /* sharedrabundvector.cpp */,
970 A7DA212D113FECD400BF472F /* sharedrabundvector.h */,
971 A7AE6302121C3408001DE6FC /* sharedrabundfloatvector.h */,
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974 A7DA212E113FECD400BF472F /* sharedsabundvector.cpp */,
975 A7DA214C113FECD400BF472F /* sparsematrix.cpp */,
976 A7DA214D113FECD400BF472F /* sparsematrix.hpp */,
977 A7DA214E113FECD400BF472F /* suffixdb.cpp */,
978 A7DA214F113FECD400BF472F /* suffixdb.hpp */,
979 A7DA2150113FECD400BF472F /* suffixnodes.cpp */,
980 A7DA2151113FECD400BF472F /* suffixnodes.hpp */,
981 A7DA2152113FECD400BF472F /* suffixtree.cpp */,
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983 A7DA215E113FECD400BF472F /* tree.cpp */,
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987 A7DA2165113FECD400BF472F /* treenode.cpp */,
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999 A7DA1FF8113FECD400BF472F /* bayesian.h */,
1000 A7DA2089113FECD400BF472F /* knn.cpp */,
1001 A7DA208A113FECD400BF472F /* knn.h */,
1002 A7DA20C4113FECD400BF472F /* phylotree.cpp */,
1003 A7DA20C5113FECD400BF472F /* phylotree.h */,
1004 A76AAD02117F322B003D8DA1 /* phylosummary.h */,
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1006 A7DA215C113FECD400BF472F /* taxonomyequalizer.cpp */,
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1021 A7DA2013113FECD400BF472F /* chimeracheckrdp.cpp */,
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1023 A7DA2015113FECD400BF472F /* chimerarealigner.cpp */,
1024 A7DA2016113FECD400BF472F /* chimerarealigner.h */,
1025 A7DA2019113FECD400BF472F /* chimeraslayer.cpp */,
1026 A7DA201A113FECD400BF472F /* chimeraslayer.h */,
1027 A7DA2038113FECD400BF472F /* decalc.cpp */,
1028 A7DA2039113FECD400BF472F /* decalc.h */,
1029 A7DA2095113FECD400BF472F /* maligner.cpp */,
1030 A7DA2096113FECD400BF472F /* maligner.h */,
1031 A7DA20C8113FECD400BF472F /* pintail.cpp */,
1032 A7DA20C9113FECD400BF472F /* pintail.h */,
1033 A7DA2145113FECD400BF472F /* slayer.cpp */,
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1039 A7CB5953114033220010EB83 /* read */ = {
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1044 A7DA2053113FECD400BF472F /* formatmatrix.h */,
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1047 A7DA20DF113FECD400BF472F /* readblast.cpp */,
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1049 A7DA20E1113FECD400BF472F /* readcluster.cpp */,
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1053 A7DA20E7113FECD400BF472F /* readmatrix.hpp */,
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1087 sourceTree = "<group>";
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1094 A7F6C9D512425D4600299875 /* metastats.h */,
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