From d2496f2aaae8022e04d10b9fd09eb305026a77df Mon Sep 17 00:00:00 2001
From: peterjc
Date: Fri, 30 Mar 2012 17:35:38 +0100
Subject: [PATCH] Fix silly typo
---
padding.c | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/padding.c b/padding.c
index b80463f..6e40833 100644
--- a/padding.c
+++ b/padding.c
@@ -136,7 +136,7 @@ int bam_pad2unpad(bamFile in, bamFile out)
pre_op = bam_cigar_op(cigar2[i-2]);
post_op = bam_cigar_op(cigar2[i]);
/* Note don't need to check for X/= as code above will use M only */
- if ((pre_op == BAM_CMATCH || pre_op == BAM_CDIFF) || (post_op == BAM_CMATCH || post_op == BAM_CDIFF)) {
+ if ((pre_op == BAM_CMATCH || pre_op == BAM_CDIFF) && (post_op == BAM_CMATCH || post_op == BAM_CDIFF)) {
/* This is a redundant P operator */
cigar2[i-1] = 0; // i.e. 0M
/* If had same operator either side, combine them in post_op */
--
2.39.2