link to tree id

[don.git] / posts / shrinking_gene_names.mdwn

diff --git a/posts/shrinking_gene_names.mdwn b/posts/shrinking_gene_names.mdwn
index 7d2be060bc2f84f5a8fade105cf6cc7bfd7308c8..410b4d60388152aa8db71e96e83b216e5b4ca38c 100644 (file)
--- a/posts/shrinking_gene_names.mdwn
+++ b/posts/shrinking_gene_names.mdwn
@@ -3,10 +3,12 @@
 I've been trying to finish a paper where I compare gene expression in
 14 different placentas. One of the supplemental figures compares
 median expression in gene trees across all 14 species, but because
-tree names like ENT000001 aren't very expressive, and names like
+tree ids like 
+[ENSGT00840000129673](http://www.ensembl.org/Multi/GeneTree/Image?gt=ENSGT00840000129673) 
+aren't very expressive, and names like
 "COL11A2, COL5A3, COL4A1, COL1A1, COL2A1, COL1A2, COL4A6, COL4A5,
 COL7A1, COL27A1, COL11A1, COL4A4, COL4A3, COL3A1, COL4A2, COL5A2,
-COL5A1, COL24A1" take up too much space, wanted a function which could
+COL5A1, COL24A1" take up too much space, I wanted a function which could
 collapse the gene names into something which uses bash glob syntax to
 more succinctly list the gene names, like:
 COL{11A{1,2},1A{1,2},24A1,27A1,2A1,3A1,4A{1,2,3,4,5,6},5A{1,2,3},7A1}.