adding bzip2 support in ruby

[biopieces.git] / bp_bin / read_embl

diff --git a/bp_bin/read_embl b/bp_bin/read_embl
index 0a3558cd2e19bece6b8da8a1c00d5bbd3f91e147..ca2839bb8e22b52f6dd2370c147b7289ce0e1d71 100755 (executable)
--- a/bp_bin/read_embl
+++ b/bp_bin/read_embl
@@ -54,7 +54,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
 
   if options[:data_in]
     options[:data_in].each do |file|
-      EMBL.open(file, mode='r') do |embl_io|
+      EMBL.open(file, 'r') do |embl_io|
         embl_io.each(hash_keys, hash_feats, hash_quals) do |entry|
           output.puts entry