From: derek <derekwbarnett@gmail.com>
Date: Fri, 9 Mar 2012 05:05:24 +0000 (-0500)
Subject: PileupEngine bugfix
X-Git-Url: https://git.donarmstrong.com/?p=bamtools.git;a=commitdiff_plain;h=b75f271eefc6d076c8995060db8b3a6b040555d1

PileupEngine bugfix
---

diff --git a/src/utils/bamtools_pileup_engine.cpp b/src/utils/bamtools_pileup_engine.cpp
index 0cdb4a5..872a6d6 100644
--- a/src/utils/bamtools_pileup_engine.cpp
+++ b/src/utils/bamtools_pileup_engine.cpp
@@ -2,7 +2,7 @@
 // bamtools_pileup_engine.cpp (c) 2010 Derek Barnett, Erik Garrison
 // Marth Lab, Department of Biology, Boston College
 // ---------------------------------------------------------------------------
-// Last modified: 10 October 2011
+// Last modified: 9 March 2012 (DB)
 // ---------------------------------------------------------------------------
 // Provides pileup at position functionality for various tools.
 // ***************************************************************************
@@ -133,7 +133,7 @@ void PileupEngine::PileupEnginePrivate::ClearOldData(void) {
       
         // remove alignment if it ends before CurrentPosition
         const int endPosition = CurrentAlignments[i].GetEndPosition();
-        if ( endPosition < CurrentPosition )
+        if ( endPosition <= CurrentPosition )
             CurrentAlignments.erase(CurrentAlignments.begin() + i);
         else
             ++i;