From 1445a21d5065ea544c88be1103976c3feb63dca7 Mon Sep 17 00:00:00 2001 From: martinahansen Date: Tue, 27 Nov 2012 07:22:55 +0000 Subject: [PATCH] added -c to nuc dist plot git-svn-id: http://biopieces.googlecode.com/svn/trunk@2004 74ccb610-7750-0410-82ae-013aeee3265d --- bp_scripts/QA_Illumina_report.rb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/bp_scripts/QA_Illumina_report.rb b/bp_scripts/QA_Illumina_report.rb index 3139d49..f5b426f 100755 --- a/bp_scripts/QA_Illumina_report.rb +++ b/bp_scripts/QA_Illumina_report.rb @@ -78,7 +78,7 @@ system( analyze_vals -k SEQ -o #{analyze_vals_trim_noadapt_file} | plot_distribution -k SEQ_LEN -T 'Sequence length distribution' -X 'Sequence length' -t png -o #{lendist_file} | plot_scores -c -t png -o #{scores_file} | - plot_nucleotide_distribution -t png -o #{nucdist_file} | + plot_nucleotide_distribution -c -t png -o #{nucdist_file} | bin_vals -k SEQ_LEN -b 25 | plot_distribution -T '25 bases bin sequence length distribution' -X 'Sequence length' -k SEQ_LEN_BIN -t png -o #{lendist_bin_file} | mean_scores | -- 2.39.2