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]> git.donarmstrong.com Git - samtools.git/history - bcftools/vcfutils.pl

2011-07-07	Heng Li	Release samtools-0.1.17	blob \| commitdiff \| raw
2011-02-28	Heng Li	* 0.1.12-r924:126	blob \| commitdiff \| raw \| diff to current
2011-02-03	Petr Danecek	Prevent division by zero	blob \| commitdiff \| raw \| diff to current
2011-01-19	Petr Danecek	Skip sites with unknown ref	blob \| commitdiff \| raw \| diff to current
2010-12-13	Heng Li	* samtools-0.1.12-4 (r884)	blob \| commitdiff \| raw \| diff to current
2010-12-12	Heng Li	compute max SP and max GQ from sample genotypes	blob \| commitdiff \| raw \| diff to current
2010-12-07	Heng Li	fixed a bug in vcf2fq	blob \| commitdiff \| raw \| diff to current
2010-12-05	Heng Li	Fixed a compiling error when knetfile is not used.	blob \| commitdiff \| raw \| diff to current
2010-12-04	Heng Li	vcf->fastq	blob \| commitdiff \| raw \| diff to current
2010-11-26	Heng Li	* fixed a memory violation	blob \| commitdiff \| raw \| diff to current
2010-11-18	Heng Li	* modify the filtering rule: also filter SNPs around...	blob \| commitdiff \| raw \| diff to current
2010-11-15	Heng Li	* samtools-0.1.9-16 (r822)	blob \| commitdiff \| raw \| diff to current
2010-11-12	Heng Li	* samtools-0.1.19-11 (r817)	blob \| commitdiff \| raw \| diff to current
2010-11-10	Heng Li	* samtools-0.1.9-8 (r807)	blob \| commitdiff \| raw \| diff to current
2010-11-09	Heng Li	added a double-hit filter to avoid overestimated indel...	blob \| commitdiff \| raw \| diff to current
2010-11-08	Heng Li	fixed another silly bug in mpileup's indel caller	blob \| commitdiff \| raw \| diff to current
2010-11-03	Heng Li	fixed a minor problem in the example coming with kprobaln.c	blob \| commitdiff \| raw \| diff to current
2010-10-14	Heng Li	improve the LD statistics	blob \| commitdiff \| raw \| diff to current
2010-10-13	Heng Li	* a minor fix to the -L option	blob \| commitdiff \| raw \| diff to current
2010-10-12	Heng Li	* vcfutils.pl: fixed a typo in help message	blob \| commitdiff \| raw \| diff to current
2010-10-11	Heng Li	added filter for samtools/bcftools genetated VCFs	blob \| commitdiff \| raw \| diff to current
2010-10-05	Heng Li	* removed a comment line in kaln.c	blob \| commitdiff \| raw \| diff to current
2010-10-03	Heng Li	* vcfutils.pl qstats: calculate marginal ts/tv	blob \| commitdiff \| raw \| diff to current
2010-09-20	Heng Li	improve qstats by checking the alleles as well	blob \| commitdiff \| raw \| diff to current
2010-09-17	Heng Li	convert UCSC SNP SQL dump to VCF	blob \| commitdiff \| raw \| diff to current
2010-09-17	Heng Li	hapmap2vcf convertor	blob \| commitdiff \| raw \| diff to current
2010-09-16	Heng Li	* added varFilter to vcfutils.pl	blob \| commitdiff \| raw \| diff to current
2010-09-03	Heng Li	* changed 3.434 to 4.343 (typo!)	blob \| commitdiff \| raw \| diff to current
2010-09-01	Heng Li	more commands for my own uses	blob \| commitdiff \| raw \| diff to current
2010-09-01	Heng Li	Utilities for processing VCF	blob \| commitdiff \| raw \| diff to current

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