{\footnotesize
\href{mailto:\myemail}{\myemail} \hfill
+1~714-813-8531 \\
- {\centering \href{\myweb}{\myweb} }
+ {\centering \href{\myweb}{\myweb}
+ \href{https://github.com/dondelelcaro}{https://github.com/dondelelcaro}
+ }
}
\vfill
\end{minipage}
+ *BS* in Biology
* Skills
** Genomics and Epigenomics
-+ Genomics and Epigenomics of complex human diseases including
- PTSD, Systemic Lupus Erythematosus, and Alzheimer's Disease using
- cross-sectional and longitudinal experimental designs
++ *NGS* and array-based Genomics and Epigenomics of complex human
+ diseases using *RNA-seq*, targeted DNA sequencing, *RRBS*, Illumina
+ bead arrays, and Affymetrix microarrays from sample collection to
+ publication.
++ Reproducible, scalable bioinformatics analysis using make,
+ *nextflow*, and *cwl* based workflows on cloud- and cluster-based
+ systems on terabyte-scale datasets
++ Alignment, annotation, and variant calling using existing and
+ custom-written software, including *GATK*, *bwa*, *STAR*, and
+ *kallisto*.
+ Correcting for and experimental design to overcome multiple
testing, confounders, and batch effects using Bayesian and
frequentist methods approaches
-+ Reproducible, scalable analysis using workflows on cloud- and
- cluster-based systems on terabyte-scale datasets
-+ Using evolutionary genomics to identify causal human variants
+# + Using evolutionary genomics to identify causal human variants
** Statistics
+ Statistical modeling (regression, inference, Bayesian and
frequentist approaches in very large (> 1TB) datasets)
+ Addressing confounders and batch effects
-+ Reproducible research
+# + Reproducible research
** Big Data
-+ Parallel and Cloud Computing
++ Parallel and Cloud Computing (slurm, torque, AWS, OpenStack, Azure)
+ Inter-process communication: MPI, OpenMP, Hadoop
+ Filestorage: Gluster, CEFS, GPFS, Lustre
-+ Cloud based-infrastructure: Azure, AWS, Docker, cloud-init
-+ Debian GNU/Linux system administration
++ Linux system administration
** Mentoring and Leadership
+ Mentored graduate students and Outreachy and Google Summer of Code
interns
-+ Chairperson of the Debian Technical Committee
++ Former chair of Debian's Technical Committee
+ Head developer behind https://bugs.debian.org
** Software Development
+ Languages: perl, R, C, C++, python, groovy, assembly, sh, make
studies.
** Debian Developer
+ 2004--Present. \emph{Debian Project}, Developer; Technical Committee
- Member (2010--Present), Technical Committee Chair (2015--2016).
+ Member (2010--2016), Technical Committee Chair (2015--2016).
* Authored Software
+ *[[http://bugs.debian.org][Debbugs]]*: Bug tracking software for the Debian GNU/Linux
distribution. [[https://bugs.debian.org]]