* relax tandem penalty. this will be made a command-line option in future.
if (theta <= 0.) theta = CALL_DEFTHETA;
bca = calloc(1, sizeof(bcf_callaux_t));
bca->capQ = 60;
- bca->openQ = 40; bca->extQ = 20; bca->tandemQ = 80;
+ bca->openQ = 40; bca->extQ = 20; bca->tandemQ = 100;
bca->min_baseQ = min_baseQ;
bca->e = errmod_init(1. - theta);
return bca;
#endif
#ifndef PACKAGE_VERSION
-#define PACKAGE_VERSION "0.1.9-4 (r801)"
+#define PACKAGE_VERSION "0.1.9-5 (r802)"
#endif
int bam_taf2baf(int argc, char *argv[]);