X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=pam.cpp;h=d962a363f8330a063a1d63ac2129686164bc706f;hb=HEAD;hp=98b2113238f099dfb188a2235e87be0c76d230f4;hpb=7a1e4b563011b1fe4d466d64915a3cb960747125;p=mothur.git

diff --git a/pam.cpp b/pam.cpp
index 98b2113..d962a36 100644
--- a/pam.cpp
+++ b/pam.cpp
@@ -125,10 +125,10 @@ int Pam::swapPhase() {
                             for (int j = 0; j < numSamples; j++) {
                                 if (m->control_pressed) { break; }
                                 if (dists[i][j] == Dp[j][0]) {
-                                    double small = 0.0;
-                                    if (Dp[j][1] > dists[h][j]) {   small = dists[h][j];    }
-                                    else                        {   small = Dp[j][1];       }
-                                    dz += (- Dp[j][0]+ small);
+                                    double smallValue; smallValue = 0.0;
+                                    if (Dp[j][1] > dists[h][j]) {   smallValue = dists[h][j];    }
+                                    else                        {   smallValue = Dp[j][1];       }
+                                    dz += (- Dp[j][0]+ smallValue);
                                 }else if (dists[h][j] < Dp[j][0]) {
                                     dz += (- Dp[j][0] + dists[h][j]);
                                 }