X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=deconvolutecommand.cpp;h=ec809730a036245f34dfc2bc0331b108c5d10b38;hb=60928795782d8f8648ec373d6a96b53032a77429;hp=98109ef33c488a071b04ad5ada84ffcab9d2e1f8;hpb=cbbf2f185fc7289910bb69421095c1de024c5225;p=mothur.git

diff --git a/deconvolutecommand.cpp b/deconvolutecommand.cpp
index 98109ef..ec80973 100644
--- a/deconvolutecommand.cpp
+++ b/deconvolutecommand.cpp
@@ -286,7 +286,7 @@ int DeconvoluteCommand::execute() {
 			
 			m->gobble(in);
 			
-			if(count % 1000 == 0)	{ m->mothurOut(toString(count) + "\t" + toString(sequenceStrings.size())); m->mothurOutEndLine();	}
+			if(count % 1000 == 0)	{ m->mothurOutJustToScreen(toString(count) + "\t" + toString(sequenceStrings.size()) + "\n");	}
 		}
 		
 		if(count % 1000 != 0)	{ m->mothurOut(toString(count) + "\t" + toString(sequenceStrings.size())); m->mothurOutEndLine();	}