X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_test%2Ftest%2Ftest_slice_align;h=7c97fb280a4c34777d4ccc57d96b8f443fb4e70e;hb=63a3360480ce7cfcac0f5518617ac10abfd0590c;hp=f9a7422feb117877beecac37187e8da5280f2678;hpb=308da19f6dfbbf50bbce5aa87b32e2f269650c80;p=biopieces.git diff --git a/bp_test/test/test_slice_align b/bp_test/test/test_slice_align index f9a7422..7c97fb2 100755 --- a/bp_test/test/test_slice_align +++ b/bp_test/test/test_slice_align @@ -10,6 +10,10 @@ run "$bp -I $in.1 -f TGGCGGCATG -r GCGAACGGGT -m 0 -i 0 -d 0 -O $tmp" assert_no_diff $tmp $out.2 clean +run "$bp -I $in.1 -F CATGCCGCCA -r GCGAACGGGT -m 0 -i 0 -d 0 -O $tmp" +assert_no_diff $tmp $out.2 +clean + run "$bp -I $in.1 -f TGGCGGCATG -R ACCCGTTCGC -m 0 -i 0 -d 0 -O $tmp" assert_no_diff $tmp $out.2 clean @@ -30,3 +34,6 @@ run "$bp -I $in.1 -f ATACGCTGCGGAGGCTA -r TTGCTACCAGGCGTCGAGCGGCGGACGGG -t $in.2 assert_no_diff $tmp $out.3 clean +run "$bp -I $in.1 -b 5 -e 10 -t $in.2 -O $tmp" +assert_no_diff $tmp $out.4 +clean