X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_scripts%2FQA_Illumina_report.rb;h=cc6269f1d79280aaf06ba76a20a40d6af204bffb;hb=59c0c522f4a4452b0951f33794dc797c4bcaecfe;hp=6e0ba0a4c10c9ec695daf0c81dd1fb0c5f591c6c;hpb=8b6b8cb49facd3cb2f4c6f0d98e3bb84de9a6ddf;p=biopieces.git

diff --git a/bp_scripts/QA_Illumina_report.rb b/bp_scripts/QA_Illumina_report.rb
index 6e0ba0a..cc6269f 100755
--- a/bp_scripts/QA_Illumina_report.rb
+++ b/bp_scripts/QA_Illumina_report.rb
@@ -23,13 +23,28 @@ require 'tmpdir'
 require 'base64'
 require 'erb'
 
+class Numeric
+  def commify
+    self.to_s.gsub(/(^[-+]?\d+?(?=(?>(?:\d{3})+)(?!\d))|\G\d{3}(?=\d))/, '\1,')
+  end
+end
+
 def parse_analysis(file)
   data = {}
 
   File.open(file, 'r') do |ios|
     ios.each do |line|
-      key, val = line.chomp.split(' ')
-      data[key] = val.reverse.gsub(/(\d{3})(?=\d)/, '\\1,').reverse
+      key, val = line.chomp.split(': ')
+        begin Integer(val)
+          val = val.to_i.commify
+        rescue
+          begin Float(val)
+            val = val.to_f.commify
+          rescue
+          end
+        end
+
+      data[key] = val
     end
   end