X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fread_sff;h=1410af6cddf34d225f99ba0bd3a25cb85d085568;hb=2f0fd91b461033529a4a72e161bd133252a22eb6;hp=cd9d58a88ab872630b5055ca5910c9ce7a2c5c32;hpb=b1fadc0ce9224b6a13f8deae332bb902a54c65af;p=biopieces.git diff --git a/bp_bin/read_sff b/bp_bin/read_sff index cd9d58a..1410af6 100755 --- a/bp_bin/read_sff +++ b/bp_bin/read_sff @@ -49,7 +49,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output| if options[:data_in] options[:data_in].each do |file| - SFF.open(file, mode='r') do |sff| + SFF.open(file, 'r') do |sff| sff.each do |entry| entry.mask if options[:mask] entry.clip if options[:clip]