X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fassemble_seq_idba;h=87b81a2675769dfa0dc411a48bea9d4303df3383;hb=2f0fd91b461033529a4a72e161bd133252a22eb6;hp=e600c0392143a9d8fe4df10ac72df00aa0f8f3aa;hpb=b1fadc0ce9224b6a13f8deae332bb902a54c65af;p=biopieces.git

diff --git a/bp_bin/assemble_seq_idba b/bp_bin/assemble_seq_idba
index e600c03..87b81a2 100755
--- a/bp_bin/assemble_seq_idba
+++ b/bp_bin/assemble_seq_idba
@@ -83,7 +83,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
 
     file_contig = File.join(options[:directory], "IDBA-UD", "contig.fa")
 
-		Fasta.open(file_contig, mode="r") do |fasta_io|
+		Fasta.open(file_contig, "r") do |fasta_io|
 			fasta_io.each do |entry|
 				output.puts entry.to_bp
 			end