private:
vector<string> names, outputNames;
- string fastafile, namefile, groupfile, countfile, alignfile, inputFileName, outputDir, listfile, taxfile;
+ string fastafile, namefile, groupfile, countfile, alignfile, inputFileName, outputDir, listfile, taxfile, fastqfile;
bool abort;
int readFasta();
int readList();
int readTax();
int readCount();
-
+ int readFastq();
};
#endif