#+PROPERTY: header-args:emacs-lisp :tangle don-configuration.el
+#+OPTIONS: auto-id:f
* Load debugger
# if for some reason, things get pear-shaped, we want to be able to
#+BEGIN_SRC emacs-lisp
(setq debug-on-event 'siguser2)
#+END_SRC
+* Paths
+** Update PATH
+#+BEGIN_SRC emacs-lisp
+ (add-to-list 'exec-path '"/usr/local/bin")
+ (add-to-list 'exec-path '"~/bin/")
+#+END_SRC
+** Add library paths
+#+BEGIN_SRC emacs-lisp
+(eval-when-compile
+ (let ((default-directory "~/var/emacs/elpa"))
+ (normal-top-level-add-subdirs-to-load-path))
+ )
+(add-to-list 'load-path '"~/lib/emacs_el/")
+(let ((default-directory "~/lib/emacs_el/"))
+ (normal-top-level-add-subdirs-to-load-path))
+(let ((default-directory "~/var/emacs/elpa"))
+ (normal-top-level-add-subdirs-to-load-path))
+(setq package-user-dir "~/var/emacs/elpa")
+#+END_SRC
* Initial startup stuff
** Disable startup screen
#+BEGIN_SRC emacs-lisp
#+END_SRC
* Package management
** package repositories and package manager
-Borrowed from https://github.com/nilcons/emacs-use-package-fast/ to
-load [[https://github.com/jwiegley/use-package/][use-package]] even faster
-#+BEGIN_SRC emacs-lisp
- (eval-and-compile
- ;; add /etc/ssl/ca-global/ca-certificates.crt so that we can
- ;; download packages when we're on Debian hosts which chop down the
- ;; list of available certificates
- (require 'gnutls)
- (add-to-list 'gnutls-trustfiles "/etc/ssl/ca-global/ca-certificates.crt")
- (setq package-enable-at-startup nil)
- (setq package--init-file-ensured t)
- (setq package-user-dir "~/var/emacs/elpa")
- (setq package-archives '(("gnu" . "https://elpa.gnu.org/packages/")
- ("melpa" . "https://melpa.org/packages/")
- ("org" . "http://orgmode.org/elpa/")))
- (setq use-package-verbose (not (bound-and-true-p byte-compile-current-file))))
- (mapc #'(lambda (add) (add-to-list 'load-path add))
- (eval-when-compile
- (package-initialize)
- (unless (package-installed-p 'use-package)
- (package-refresh-contents)
- (package-install 'use-package))
- (let ((package-user-dir-real (file-truename package-user-dir)))
- ;; The reverse is necessary, because outside we mapc
- ;; add-to-list element-by-element, which reverses.
- (nreverse (apply #'nconc
- ;; Only keep package.el provided loadpaths.
- (mapcar #'(lambda (path)
- (if (string-prefix-p package-user-dir-real path)
- (list path)
- nil))
- load-path))))))
-
- ;;; fix up info paths for packages
- (with-eval-after-load "info"
- (info-initialize)
- (dolist (dir (directory-files package-user-dir))
- (let ((fdir (concat (file-name-as-directory package-user-dir) dir)))
- (unless (or (member dir '("." ".." "archives" "gnupg"))
- (not (file-directory-p fdir))
- (not (file-exists-p (concat (file-name-as-directory fdir) "dir"))))
- (add-to-list 'Info-directory-list fdir)))))
-
-
- (eval-when-compile
- (require 'use-package))
- (require 'bind-key)
- (require 'diminish)
+#+BEGIN_SRC emacs-lisp
+ (require 'use-package)
+(require 'gnutls)
+ (add-to-list 'gnutls-trustfiles "/etc/ssl/ca-global/ca-certificates.crt")
+ (setq package-enable-at-startup nil)
+ (setq package--init-file-ensured t)
+ (setq package-user-dir "~/var/emacs/elpa")
+ (setq package-archives '(("gnu" . "https://elpa.gnu.org/packages/")
+ ("melpa" . "https://melpa.org/packages/")
+ ("org" . "http://orgmode.org/elpa/")))
+ (setq use-package-verbose (not (bound-and-true-p byte-compile-current-file)))
+
#+END_SRC
** Paradox
#+BEGIN_SRC emacs-lisp
(use-package paradox
:ensure paradox
:commands (paradox-upgrade-packages paradox-list-packages)
- :config (setq paradox-execute-asynchronously t)
+ :config
+ (setq paradox-execute-asynchronously t)
+ (setq paradox-github-token t) ; I don't want to be prompted about this integration
)
#+END_SRC
-* Add library paths
-
-#+BEGIN_SRC emacs-lisp
- (add-to-list 'load-path '"~/lib/emacs_el/")
- (add-to-list 'load-path '"~/lib/emacs_el/magit-annex")
-#+END_SRC
* Disable custom-vars
#+BEGIN_SRC emacs-lisp
;; Set the custom file to /dev/null and don't bother to load it
)
#+END_SRC
+
+** Flycheck
+#+begin_src emacs-lisp :tangle yes
+(use-package flycheck
+ :ensure t
+ :diminish 🦋
+ :if (version<= "24.4" emacs-version)
+ :commands flycheck-mode
+ :hook ((prog-mode . flycheck-mode)
+ )
+)
+;; Other pkgs
+(use-package flycheck-tip
+ :ensure t
+ :commands 'flycheck-tip-cycle
+ :after flycheck
+ :bind (:map flycheck-mode-map
+ ("C-c C-n" . flycheck-tip-cycle)))
+
+(use-package flycheck-package
+ :ensure t)
+
+(use-package flycheck-checkpatch
+ :ensure t
+ :config (flycheck-checkpatch-setup)
+ :config (setq flycheck-checkers (delete 'checkpatch
+ flycheck-checkers))
+ :config (add-to-list 'flycheck-checkers 'checkpatch t))
+#+end_src
+
** Flymake
#+begin_src emacs-lisp :tangle yes
(use-package flymake
** SQL mode
#+BEGIN_SRC emacs-lisp
; load sql-indent when sql is loaded
+(use-package sql-indent
+ :hook sql-mode
+ )
(use-package sql
:mode (("\\.sql\\'" . sql-mode))
- :config
- (require sql-indent))
+ )
#+END_SRC
** Ediff
#+BEGIN_SRC emacs-lisp
("o" (find-file "~/projects/org-notes/ool.org"))
("f" (find-file "~/projects/org-notes/fh.org"))
("s" (find-file "~/projects/org-notes/sndservers.org"))
- ("r" (find-file "~/projects/org-notes/refile.org"))
+ ("r" (find-file my/org-refile-file))
("p" (find-file "~/projects/research/papers_to_read.org"))
("R" (find-file "~/projects/research/paper_notes.org"))
("h" (find-file "~/projects/org-notes/hpcbio.org"))
(defun dla/ess-region-remote-eval (start end)
"Evaluate region in a remote ESS instance"
(interactive "r")
- (shell-command-on-region start end "eval_r" (get-buffer-create "***essregionremoteeval***"))
- kill-buffer "***essregionremoteeval***")
+ (shell-command-on-region start end "eval_r" (get-buffer-create "***essregionremoteeval***") nil nil nil)
+ (kill-buffer "***essregionremoteeval***"))
;; Don't restore history or save workspace image
'(inferior-R-args "--no-restore-history --no-save")
)
)
#+END_SRC
+** YAML Mode
+#+BEGIN_SRC emacs-lisp
+ (use-package yaml-mode
+ ;; add ess to the x major mode
+ :mode ("\\.\\(yaml|yml\\)\\'" . yaml-mode)
+ )
+#+END_SRC
+
** Polymode
#+BEGIN_SRC emacs-lisp
(use-package poly-noweb
(setq atomic-chrome-buffer-open-style 'full)
)
#+END_SRC
+** Edit Server
+#+BEGIN_SRC emacs-lisp
+ (use-package edit-server
+ :ensure t
+ :commands edit-server-start
+ :init (if after-init-time
+ (edit-server-start)
+ (add-hook 'after-init-hook
+ #'(lambda() (edit-server-start))))
+ :config (setq edit-server-new-frame-alist
+ '((name . "Edit with Emacs FRAME")
+ (top . 200)
+ (left . 200)
+ (width . 80)
+ (height . 25)
+ (minibuffer . t)
+ (menu-bar-lines . t)
+ (window-system . x)))
+ )
+#+END_SRC
** Multiple Cursors
- :PROPERTIES:
- :ID: 6fcf218b-a762-4c37-9339-a8202ddeb544
- :END:
[[https://github.com/magnars/multiple-cursors.el][Multiple Cursors]]
#+BEGIN_SRC emacs-lisp
(use-package multiple-cursors
(setq default-abbrev-mode t))
#+END_SRC
+** Debugging (realgud)
+#+BEGIN_SRC emacs-lisp
+(use-package realgud
+ :ensure t
+ )
+#+END_SRC
+** Python Programming
+#+BEGIN_SRC emacs-lisp
+(use-package python-mode
+ :hook
+ (python-mode . pyenv-mode)
+ (python-mode . flycheck-mode)
+ (python-mode . company-mode)
+ (python-mode . blacken-mode)
+ (python-mode . yas-minor-mode)
+ (python-mode . anaconda-mode)
+ )
+(use-package pyenv
+ :ensure t
+ )
+(use-package blacken
+ :init
+ (setq-default blacken-fast-unsafe t)
+ (setq-default blacken-line-length 80)
+ :ensure t)
+(use-package anaconda-mode
+ :ensure t
+ )
+
+(use-package elpy
+ :ensure t
+ :init
+ (elpy-enable)
+ )
+#+END_SRC
+# *** Jedi
+# #+BEGIN_SRC emacs-lisp
+# (use-package company-jedi
+# :ensure t
+# :hook (python-mode . (add-to-list 'company-backends 'company-jedi))
+# :hook (python-mode . 'jedi:setup)
+# :config
+# (setq jedi:complete-on-dot t)
+# )
+# #+END_SRC
+*** Black
+#+begin_src emacs-lisp :tangle yes
+ (use-package python-black
+ :demand t
+ :after python)
+#+end_src
+*** Sphinx Documentation
+#+begin_src emacs-lisp :tangle yes
+ (use-package numpydoc
+ :ensure t
+ :after python
+ :bind (:map python-mode-map
+ ("C-c C-n" . numpydoc-generate)))
+ (use-package sphinx-doc
+ :ensure t
+ :config
+ (sphinx-doc-mode t)
+ (setq sphinx-doc-include-types t)
+ :after python)
+#+end_src
** Go language
#+BEGIN_SRC emacs-lisp
(use-package go-mode
; org mode agenda files
(setq org-agenda-files
- (quote ("~/projects/org-notes/debbugs.org"
- "~/projects/org-notes/notes.org"
- "~/projects/org-notes/holidays.org"
- "~/projects/org-notes/refile.org"
- "~/projects/org-notes/diary.org"
- "~/projects/org-notes/ool.org"
- "~/projects/org-notes/sndservers.org"
- "~/projects/org-notes/chaim.org"
- "~/projects/org-notes/wildman.org"
- "~/projects/org-notes/uddin.org"
- "~/projects/org-notes/reviews.org"
- "~/projects/org-notes/laurel.org"
- "~/projects/org-notes/from-calendar.org"
- "~/org-mode/from-mobile.org"
- "~/projects/org-notes/fh.org")))
+ (append
+ (file-expand-wildcards "~/projects/org-notes/*.org")
+ (file-expand-wildcards "~/org-mode/from-mobile.org")
+ (file-expand-wildcards "~/org-notes-*/*.org")
+ )
+ )
+ (setq my/org-refile-file
+ (car (seq-filter
+ (lambda (file) (string-match-p (regexp-quote "/refile.org") file))
+ org-agenda-files)))
(set-register ?n (cons 'file "~/projects/org-notes/notes.org"))
- (set-register ?r (cons 'file "~/projects/org-notes/refile.org"))
+ (set-register ?r (cons 'file my/org-refile-file))
(set-register ?o (cons 'file "~/projects/org-notes/ool.org"))
(set-register ?s (cons 'file "~/projects/org-notes/sndservers.org"))
(set-register ?c (cons 'file "~/projects/org-notes/chaim.org"))
** Capture Templates
#+BEGIN_SRC emacs-lisp
(setq org-capture-templates ;; mail-specific note template, identified by "m"
- `(("m" "Mail" entry (file "~/projects/org-notes/refile.org")
+ `(("m" "Mail" entry (file my/org-refile-file)
"* %?\n\n Source: %u, [[%:link][%:description]]\n %:initial")
- ("t" "todo" entry (file "~/projects/org-notes/refile.org")
+ ("t" "todo" entry (file my/org-refile-file)
"* TODO %?\n :PROPERTIES:\n :END:\n :LOGBOOK:\n :END:\n%U\n%a\n" :clock-in t :clock-resume t)
- ("r" "respond" entry (file "~/projects/org-notes/refile.org")
+ ("r" "respond" entry (file my/org-refile-file)
"* NEXT Respond to %:from on %:subject\nSCHEDULED: %t\n%U\n%a\n" :clock-in t :clock-resume t :immediate-finish t)
- ("n" "note" entry (file "~/projects/org-notes/refile.org")
+ ("n" "note" entry (file my/org-refile-file)
"* %? :NOTE:\n%U\n%a\n" :clock-in t :clock-resume t)
- ("s" "schedule" entry (file "~/projects/org-notes/refile.org")
+ ("s" "schedule" entry (file my/org-refile-file)
"* %? :cal:\n%^{scheduled:}t\n%U\n%a\n" :clock-in t :clock-resume t)
("j" "Journal" entry (file+datetree "~/projects/org-notes/diary.org")
"* %?\n%U\n" :clock-in t :clock-resume t)
- ("w" "org-protocol" entry (file "~/projects/org-notes/refile.org")
+ ("w" "org-protocol" entry (file my/org-refile-file)
"* TODO Review %c\n%U\n" :immediate-finish t)
- ("M" "Meeting" entry (file "~/projects/org-notes/refile.org")
+ ("M" "Meeting" entry (file my/org-refile-file)
"* MEETING with %? :MEETING:\n%U" :clock-in t :clock-resume t)
- ("S" "Seminar" entry (file "~/projects/org-notes/refile.org")
+ ("S" "Seminar" entry (file my/org-refile-file)
"* SEMINAR notes %? :SEMINAR:\n%U" :clock-in t :clock-resume t)
("P" "Paper to read" entry (file+headline "~/projects/research/papers_to_read.org" "Refile")
"* TODO Get/Read %? \n%U" :clock-in t :clock-resume t)
- ("p" "Phone call" entry (file "~/projects/org-notes/refile.org")
+ ("p" "Phone call" entry (file my/org-refile-file)
"* PHONE %? :PHONE:\n%U" :clock-in t :clock-resume t)
("J" "job" entry (file+olp "~/projects/org-notes/notes.org"
"Jobs"
,(format-time-string "Positions %Y"))
"* TODO Apply for %? :job:\nSCHEDULED: <%<%Y-%m-%d>>\n%U\n%x\n" :clock-in t :clock-resume t)
- ("h" "Habit" entry (file "~/projects/org-notes/refile.org")
+ ("h" "Habit" entry (file my/org-refile-file)
"* NEXT %?\n%U\n%a\nSCHEDULED: %(format-time-string \"<%Y-%m-%d .+1d/3d>\")\n:PROPERTIES:\n:STYLE: habit\n:REPEAT_TO_STATE: NEXT\n:END:\n%a\n")
)
)
(interactive)
(save-excursion
(org-back-to-heading 'invisible-ok)
- (hide-other)
+ (outline-hide-other)
(org-cycle)
(org-cycle)
(org-cycle)))
(setq org-use-fast-todo-selection t)
(setq org-treat-S-cursor-todo-selection-as-state-change nil)
- ; create function to create headlines in file. This comes from
- ; http://stackoverflow.com/questions/13340616/assign-ids-to-every-entry-in-org-mode
- (defun my/org-add-ids-to-headlines-in-file ()
- "Add ID properties to all headlines in the current file which
- do not already have one."
- (interactive)
- (org-map-entries 'org-id-get-create))
- (defun dla/org-update-ids-to-headlines-in-file ()
- "Add or replace ID properties to all headlines in the current file
- (or narrowed region)."
- (interactive)
- (org-map-entries '(lambda () (org-id-get-create t))))
- ; if we wanted to do this to every buffer, do the following:
- ; (add-hook 'org-mode-hook
- ; (lambda ()
- ; (add-hook 'before-save-hook 'my/org-add-ids-to-headlines-in-file nil 'local)))
+; create function to create headlines in file. This comes from
+; http://stackoverflow.com/questions/13340616/assign-ids-to-every-entry-in-org-mode
+(defun my/org-add-ids-to-headlines-in-file ()
+ "Add ID properties to all headlines in the current file which
+do not already have one."
+ (interactive)
+ (save-excursion
+ (widen)
+ (goto-char (point-min))
+ (when (not (re-search-forward "^#\\+OPTIONS:.*auto-id:f" (point-max) t))
+ (org-map-entries 'org-id-get-create))))
+(defun dla/org-update-ids-to-headlines-in-file ()
+ "Add or replace ID properties to all headlines in the current file
+(or narrowed region)."
+ (interactive)
+
+ (org-map-entries '(lambda () (org-id-get-create t))))
+; if we wanted to do this to every buffer, do the following:
+(add-hook 'org-mode-hook
+ (lambda ()
+ (add-hook 'before-save-hook 'my/org-add-ids-to-headlines-in-file nil 'local)))
#+END_SRC
** Org ID locations
#+BEGIN_SRC emacs-lisp
#+END_SRC
** LaTeX configuration
- :PROPERTIES:
- :ID: 7135ba17-6a50-4eed-84ca-b90afa5b12f8
- :END:
#+BEGIN_SRC emacs-lisp
(use-package ox-extra
:config
;; We're in the agenda
;;
(let* ((marker (org-get-at-bol 'org-hd-marker))
- (tags (org-with-point-at marker (org-get-tags-at))))
+ (tags (org-with-point-at marker (org-get-tags))))
(if (and (eq arg 4) tags)
(org-agenda-clock-in '(16))
(bh/clock-in-organization-task-as-default)))
)
#+END_SRC
* Keybindings
+** Home/End Begining/End of line
+#+BEGIN_SRC emacs-lisp
+ (global-set-key [home] 'move-beginning-of-line)
+ (global-set-key [end] 'move-end-of-line)
+#+END_SRC
** Goto line
#+BEGIN_SRC emacs-lisp
(global-unset-key "\M-g")
(show-paren-mode 1)
(setq show-paren-delay 0.2)
+#+END_SRC
+** My Username
+#+BEGIN_SRC emacs-lisp
(setq user-mail-address "don@donarmstrong.com")
+#+END_SRC
+** Use primary selection on unix machines
+#+BEGIN_SRC emacs-lisp
;; switch back to the old primary selection method
- (setq x-select-enable-clipboard nil)
- (setq x-select-enable-primary t)
+ (if (or (string-equal system-type "darwin")
+ (string-equal system-type "windows")
+ )
+ (progn
+ (setq select-enable-clipboard t)
+ (setq select-enable-primary nil)
+ )
+ (progn
+ (setq select-enable-clipboard nil)
+ (setq select-enable-primary t)
+ ))
; (setq mouse-drag-copy-region t)
- (fset 'perl-mode 'cperl-mode)
- ;;(load-file "cperl-mode.el")
-
;; tramp configuration
(setq tramp-use-ssh-controlmaster-options nil)
projects / lib.git / blobdiff