#+PROPERTY: header-args:emacs-lisp :tangle don-configuration.el
+#+OPTIONS: auto-id:f
* Load debugger
# if for some reason, things get pear-shaped, we want to be able to
#+BEGIN_SRC emacs-lisp
(setq debug-on-event 'siguser2)
#+END_SRC
+* Paths
+** Update PATH
+#+BEGIN_SRC emacs-lisp
+ (add-to-list 'exec-path '"/usr/local/bin")
+ (add-to-list 'exec-path '"~/bin/")
+#+END_SRC
+** Add library paths
+#+BEGIN_SRC emacs-lisp
+(eval-when-compile
+ (let ((default-directory "~/var/emacs/elpa"))
+ (normal-top-level-add-subdirs-to-load-path))
+ )
+(add-to-list 'load-path '"~/lib/emacs_el/")
+(let ((default-directory "~/lib/emacs_el/"))
+ (normal-top-level-add-subdirs-to-load-path))
+(let ((default-directory "~/var/emacs/elpa"))
+ (normal-top-level-add-subdirs-to-load-path))
+(setq package-user-dir "~/var/emacs/elpa")
+#+END_SRC
* Initial startup stuff
** Disable startup screen
#+BEGIN_SRC emacs-lisp
#+END_SRC
* Package management
** package repositories and package manager
-Borrowed from https://github.com/nilcons/emacs-use-package-fast/ to
-load [[https://github.com/jwiegley/use-package/][use-package]] even faster
-#+BEGIN_SRC emacs-lisp
- (eval-and-compile
- ;; add /etc/ssl/ca-global/ca-certificates.crt so that we can
- ;; download packages when we're on Debian hosts which chop down the
- ;; list of available certificates
- (require 'gnutls)
- (add-to-list 'gnutls-trustfiles "/etc/ssl/ca-global/ca-certificates.crt")
- (setq package-enable-at-startup nil)
- (setq package--init-file-ensured t)
- (setq package-user-dir "~/var/emacs/elpa")
- (setq package-archives '(("gnu" . "https://elpa.gnu.org/packages/")
- ("melpa" . "https://melpa.org/packages/")
- ("org" . "http://orgmode.org/elpa/")))
- (setq use-package-verbose (not (bound-and-true-p byte-compile-current-file))))
- (mapc #'(lambda (add) (add-to-list 'load-path add))
- (eval-when-compile
- (package-initialize)
- (unless (package-installed-p 'use-package)
- (package-refresh-contents)
- (package-install 'use-package))
- (let ((package-user-dir-real (file-truename package-user-dir)))
- ;; The reverse is necessary, because outside we mapc
- ;; add-to-list element-by-element, which reverses.
- (nreverse (apply #'nconc
- ;; Only keep package.el provided loadpaths.
- (mapcar #'(lambda (path)
- (if (string-prefix-p package-user-dir-real path)
- (list path)
- nil))
- load-path))))))
-
- ;;; fix up info paths for packages
- (with-eval-after-load "info"
- (info-initialize)
- (dolist (dir (directory-files package-user-dir))
- (let ((fdir (concat (file-name-as-directory package-user-dir) dir)))
- (unless (or (member dir '("." ".." "archives" "gnupg"))
- (not (file-directory-p fdir))
- (not (file-exists-p (concat (file-name-as-directory fdir) "dir"))))
- (add-to-list 'Info-directory-list fdir)))))
-
-
- (eval-when-compile
- (require 'use-package))
- (require 'diminish)
- (require 'bind-key)
+#+BEGIN_SRC emacs-lisp
+ (require 'use-package)
+(require 'gnutls)
+ (add-to-list 'gnutls-trustfiles "/etc/ssl/ca-global/ca-certificates.crt")
+ (setq package-enable-at-startup nil)
+ (setq package--init-file-ensured t)
+ (setq package-user-dir "~/var/emacs/elpa")
+ (setq package-archives '(("gnu" . "https://elpa.gnu.org/packages/")
+ ("melpa" . "https://melpa.org/packages/")
+ ("org" . "http://orgmode.org/elpa/")))
+ (setq use-package-verbose (not (bound-and-true-p byte-compile-current-file)))
+
#+END_SRC
** Paradox
#+BEGIN_SRC emacs-lisp
(use-package paradox
:ensure paradox
:commands (paradox-upgrade-packages paradox-list-packages)
- :config (setq paradox-execute-asynchronously t)
+ :config
+ (setq paradox-execute-asynchronously t)
+ (setq paradox-github-token t) ; I don't want to be prompted about this integration
)
#+END_SRC
-* Add library paths
-
-#+BEGIN_SRC emacs-lisp
- (add-to-list 'load-path '"~/lib/emacs_el/")
- (add-to-list 'load-path '"~/lib/emacs_el/magit-annex")
-#+END_SRC
* Disable custom-vars
#+BEGIN_SRC emacs-lisp
;; Set the custom file to /dev/null and don't bother to load it
#+BEGIN_SRC emacs-lisp
;; From http://www.emacswiki.org/emacs/LoadingLispFiles
;; execute conditional code when loading libraries
-(defmacro with-library (symbol &rest body)
- `(when (require ,symbol nil t)
- ,@body))
-(put 'with-library 'lisp-indent-function 1)
+; (defmacro with-library (symbol &rest body)
+; `(when (require ,symbol nil t)
+; ,@body))
+; (put 'with-library 'lisp-indent-function 1)
#+END_SRC
* Variables
#+BEGIN_SRC emacs-lisp
(use-package flyspell
:ensure t
- :diminish flyspell-mode 🐝
+ :delight flyspell-mode 🐝
:config
(add-hook 'text-mode-hook 'turn-on-flyspell)
(add-hook 'c-mode-common-hook 'flyspell-prog-mode)
)
#+END_SRC
+
+** Flycheck
+#+begin_src emacs-lisp :tangle yes
+(use-package flycheck
+ :ensure t
+ :delight 🦋
+ :if (version<= "24.4" emacs-version)
+ :commands flycheck-mode
+ :hook ((prog-mode . flycheck-mode)
+ )
+)
+;; Other pkgs
+(use-package flycheck-tip
+ :ensure t
+ :commands 'flycheck-tip-cycle
+ :after flycheck
+ :bind (:map flycheck-mode-map
+ ("C-c C-n" . flycheck-tip-cycle)))
+
+(use-package flycheck-package
+ :ensure t)
+
+(use-package flycheck-checkpatch
+ :ensure t
+ :config (flycheck-checkpatch-setup)
+ :config (setq flycheck-checkers (delete 'checkpatch
+ flycheck-checkers))
+ :config (add-to-list 'flycheck-checkers 'checkpatch t))
+#+end_src
+
** Flymake
#+begin_src emacs-lisp :tangle yes
(use-package flymake
- :diminish "Φ")
+ :delight "Φ")
#+end_src
** Winnermode
#+BEGIN_SRC emacs-lisp
(use-package eyebrowse
:ensure t
- :diminish eyebrowse-mode
+ :delight eyebrowse-mode
:init (setq eyebrowse-keymap-prefix (kbd "C-c e"))
:config (progn
(setq eyebrowse-wrap-around t)
#+END_SRC
** Mode line cleaning
-*** Diminish
+*** Delight
#+BEGIN_SRC emacs-lisp
- (use-package diminish
+ (use-package delight
:ensure t)
#+END_SRC
** Snippets
*** Yasnippet
#+BEGIN_SRC emacs-lisp
- (use-package yasnippet
- :ensure t
- :diminish yas-minor-mode
- :config (progn
- (yas-global-mode)
- (setq yas-verbosity 1)
- (define-key yas-minor-mode-map (kbd "<tab>") nil)
- (define-key yas-minor-mode-map (kbd "TAB") nil)
- (define-key yas-minor-mode-map (kbd "<backtab>") 'yas-expand)
- (setq yas-snippet-dirs '("~/lib/emacs_el/snippets/"
- "~/lib/emacs_el/yasnippet-snippets/snippets/"))
- (add-to-list 'hippie-expand-try-functions-list
- 'yas-hippie-try-expand)
- (yas-reload-all)
- )
- )
+(use-package yasnippet
+ :ensure t
+ :delight yas-minor-mode
+ :config (progn
+ (yas-global-mode)
+ (setq yas-verbosity 1)
+ (define-key yas-minor-mode-map (kbd "<tab>") nil)
+ (define-key yas-minor-mode-map (kbd "TAB") nil)
+ (define-key yas-minor-mode-map (kbd "<backtab>") nil)
+ (setq yas-snippet-dirs '("~/lib/emacs_el/snippets/"
+ "~/lib/emacs_el/yasnippet-snippets/snippets/"))
+ (add-to-list 'hippie-expand-try-functions-list
+ 'yas-hippie-try-expand)
+ (yas-reload-all)
+ )
+ )
#+END_SRC
*** Auto-YASnippet
#+BEGIN_SRC emacs-lisp
)
)
#+END_SRC
+** Treemacs: Tree file viewer
+#+BEGIN_SRC emacs-lisp
+;; Provides workspaces with file browsing (tree file viewer)
+;; and project management when coupled with `projectile`.
+
+(use-package treemacs
+ :ensure t
+ :defer t
+ :config
+ (setq treemacs-no-png-images t
+ treemacs-width 24)
+ :bind ("C-c t" . treemacs))
+#+END_SRC
+** LSP mode
+#+BEGIN_SRC emacs-lisp
+(use-package lsp-mode
+ :ensure t
+ :defer t
+ :commands (lsp lsp-deferred)
+ :init (setq lsp-keymap-prefix "C-c l")
+ :hook (python-mode . lsp-deferred))
+;; Provides visual help in the buffer
+;; For example definitions on hover.
+;; The `imenu` lets me browse definitions quickly.
+(use-package lsp-ui
+ :ensure t
+ :defer t
+ :config
+ (setq lsp-ui-sideline-enable nil
+ lsp-ui-doc-delay 2)
+ :hook (lsp-mode . lsp-ui-mode)
+ :bind (:map lsp-ui-mode-map
+ ("C-c i" . lsp-ui-imenu)))
+;; Language server for Python
+;; Read the docs for the different variables set in the config.
+(use-package lsp-pyright
+ :ensure t
+ :defer t
+ :config
+ (setq lsp-clients-python-library-directories '("/usr/" "~/miniconda3/pkgs"))
+ (setq lsp-pyright-disable-language-service nil
+ lsp-pyright-disable-organize-imports nil
+ lsp-pyright-auto-import-completions t
+ lsp-pyright-use-library-code-for-types t
+ lsp-pyright-venv-path "~/miniconda3/envs")
+ :hook ((python-mode . (lambda ()
+ (require 'lsp-pyright) (lsp-deferred)))))
+#+END_SRC
** Company
#+BEGIN_SRC emacs-lisp
(use-package company
company-minimum-prefix-length 1
company-global-modes '(not)
company-lighter-base "(C)")
+ (setq company-backends '(company-capf
+ company-keywords
+ company-semantic
+ company-files
+ company-etags
+ company-elisp
+ company-clang
+ company-irony-c-headers
+ company-irony
+ company-jedi
+ company-cmake
+ company-ispell
+ company-yasnippet))
(global-company-mode 1)
:bind (:map company-active-map
("C-n" . company-select-next)
#+END_SRC
*** C/C++
#+BEGIN_SRC emacs-lisp
- (use-package company-c-headers
- :ensure t
- :config (progn
- (defun malb/ede-object-system-include-path ()
- "Return the system include path for the current buffer."
- (when ede-object
- (ede-system-include-path ede-object)))
-
- (setq company-c-headers-path-system
- #'malb/ede-object-system-include-path)
+(use-package company-c-headers
+ :ensure t
+ :config (progn
+ (defun malb/ede-object-system-include-path ()
+ "Return the system include path for the current buffer."
+ (when ede-object
+ (ede-system-include-path ede-object)))
- (add-to-list 'company-backends #'company-c-headers)))
+ (setq company-c-headers-path-system
+ #'malb/ede-object-system-include-path)))
#+END_SRC
*** Python
#+BEGIN_SRC emacs-lisp
-(use-package company-anaconda
+(use-package company-jedi
:ensure t
- :config (add-to-list 'company-backends #'company-anaconda))
+ :hook (python-mode . 'jedi:setup)
+ :config
+ (setq jedi:complete-on-dot t)
+ )
#+END_SRC
*** Perl
#+BEGIN_SRC emacs-lisp
)
)
#+END_SRC
+**** Bibtex
#+BEGIN_SRC emacs-lisp
(use-package company-bibtex
:ensure t
#+END_SRC
*** Shell
- #+BEGIN_SRC emacs-lisp
- (use-package company-shell
- :ensure t
- :config (progn
- (setq company-shell-modes '(sh-mode shell-mode))
- (add-to-list 'company-backends 'company-shell)))
- #+END_SRC
+#+BEGIN_SRC emacs-lisp
+(use-package company-shell
+ :ensure t
+ :config (progn
+ (setq company-shell-modes '(sh-mode shell-mode))
+ (add-to-list 'company-backends 'company-shell)))
+#+END_SRC
*** YaSnippet
- Add YasSippet support for all company backends. ([[https://github.com/syl20bnr/spacemacs/pull/179][source]])
+Add YasSippet support for all company backends. ([[https://github.com/syl20bnr/spacemacs/pull/179][source]])
- *Note:* Do this at the end of =company-mode= config.
+*Note:* Do this at the end of =company-mode= config.
- #+BEGIN_SRC emacs-lisp
- (defvar malb/company-mode/enable-yas t
- "Enable yasnippet for all backends.")
+#+BEGIN_SRC emacs-lisp
+(defvar malb/company-mode/enable-yas t
+ "Enable yasnippet for all backends.")
- (defun malb/company-mode/backend-with-yas (backend)
- (if (or (not malb/company-mode/enable-yas)
- (and (listp backend)
- (member 'company-yasnippet backend)))
- backend
- (append (if (consp backend) backend (list backend))
- '(:with company-yasnippet))))
+(defun malb/company-mode/backend-with-yas (backend)
+ (if (or (not malb/company-mode/enable-yas)
+ (and (listp backend)
+ (member 'company-yasnippet backend)))
+ backend
+ (append (if (consp backend) backend (list backend))
+ '(:with company-yasnippet))))
- (setq company-backends
- (mapcar #'malb/company-mode/backend-with-yas company-backends))
- #+END_SRC
+(setq company-backends
+ (mapcar #'malb/company-mode/backend-with-yas company-backends))
+#+END_SRC
*** All the words
- Enable/disable company completion from ispell dictionaries ([[https://github.com/redguardtoo/emacs.d/blob/master/lisp/init-company.el][source]])
-
- #+BEGIN_SRC emacs-lisp
- (defun malb/toggle-company-ispell ()
- (interactive)
- (cond
- ((member '(company-ispell :with company-yasnippet) company-backends)
- (setq company-backends (delete '(company-ispell :with company-yasnippet) company-backends))
- (add-to-list 'company-backends '(company-dabbrev :with company-yasnippet) t)
- (message "company-ispell disabled"))
- (t
- (setq company-backends (delete '(company-dabbrev :with company-yasnippet) company-backends))
- (add-to-list 'company-backends '(company-ispell :with company-yasnippet) t)
- (message "company-ispell enabled!"))))
-
- (defun malb/company-ispell-setup ()
- ;; @see https://github.com/company-mode/company-mode/issues/50
- (when (boundp 'company-backends)
- (make-local-variable 'company-backends)
- (setq company-backends (delete '(company-dabbrev :with company-yasnippet) company-backends))
- (add-to-list 'company-backends '(company-ispell :with company-yasnippet) t)
- ;; https://github.com/redguardtoo/emacs.d/issues/473
- (if (and (boundp 'ispell-alternate-dictionary)
- ispell-alternate-dictionary)
- (setq company-ispell-dictionary ispell-alternate-dictionary))))
- #+END_SRC
+Enable/disable company completion from ispell dictionaries ([[https://github.com/redguardtoo/emacs.d/blob/master/lisp/init-company.el][source]])
+
+#+BEGIN_SRC emacs-lisp
+(defun malb/toggle-company-ispell ()
+ (interactive)
+ (cond
+ ((member '(company-ispell :with company-yasnippet) company-backends)
+ (setq company-backends (delete '(company-ispell :with company-yasnippet) company-backends))
+ (add-to-list 'company-backends '(company-dabbrev :with company-yasnippet) t)
+ (message "company-ispell disabled"))
+ (t
+ (setq company-backends (delete '(company-dabbrev :with company-yasnippet) company-backends))
+ (add-to-list 'company-backends '(company-ispell :with company-yasnippet) t)
+ (message "company-ispell enabled!"))))
+
+(defun malb/company-ispell-setup ()
+ ;; @see https://github.com/company-mode/company-mode/issues/50
+ (when (boundp 'company-backends)
+ (make-local-variable 'company-backends)
+ (setq company-backends (delete '(company-dabbrev :with company-yasnippet) company-backends))
+ (add-to-list 'company-backends '(company-ispell :with company-yasnippet) t)
+ ;; https://github.com/redguardtoo/emacs.d/issues/473
+ (if (and (boundp 'ispell-alternate-dictionary)
+ ispell-alternate-dictionary)
+ (setq company-ispell-dictionary ispell-alternate-dictionary))))
+#+END_SRC
*** Tab DWIM
([[http://emacs.stackexchange.com/q/21182/8930][source]], [[http://emacs.stackexchange.com/q/7908/8930][source]])
#+BEGIN_SRC emacs-lisp
- (defun malb/indent-fold-or-complete (&optional arg)
- (interactive "P")
+(defun malb/indent-fold-or-complete (&optional arg)
+ (interactive "P")
+ (cond
+ ;; if a region is active, indent
+ ((use-region-p)
+ (indent-region (region-beginning)
+ (region-end)))
+ ;; if the next char is space or eol, but prev char not whitespace
+ ((and (not (active-minibuffer-window))
+ (or (looking-at " ")
+ (looking-at "$"))
+ (looking-back "[^[:space:]]")
+ (not (looking-back "^")))
+
+ (cond (company-mode (company-complete-common))
+ (auto-complete-mode (auto-complete))))
+
+ ;; no whitespace anywhere
+ ((and (not (active-minibuffer-window))
+ (looking-at "[^[:space:]]")
+ (looking-back "[^[:space:]]")
+ (not (looking-back "^")))
(cond
- ;; if a region is active, indent
- ((use-region-p)
- (indent-region (region-beginning)
- (region-end)))
- ;; if the next char is space or eol, but prev char not whitespace
- ((and (not (active-minibuffer-window))
- (or (looking-at " ")
- (looking-at "$"))
- (looking-back "[^[:space:]]")
- (not (looking-back "^")))
-
- (cond (company-mode (company-complete-common))
- (auto-complete-mode (auto-complete))))
-
- ;; no whitespace anywhere
- ((and (not (active-minibuffer-window))
- (looking-at "[^[:space:]]")
- (looking-back "[^[:space:]]")
- (not (looking-back "^")))
- (cond
- ((bound-and-true-p hs-minor-mode)
- (save-excursion (end-of-line) (hs-toggle-hiding)))
- ((bound-and-true-p outline-minor-mode)
- (save-excursion (outline-cycle)))))
-
- ;; by default just call whatever was bound
- (t
- (let ((fn (or (lookup-key (current-local-map) (kbd "TAB"))
- 'indent-for-tab-command)))
- (if (not (called-interactively-p 'any))
- (fn arg)
- (setq this-command fn)
- (call-interactively fn))))))
-
- (defun malb/toggle-fold ()
- (interactive)
- (cond ((eq major-mode 'org-mode)
- (org-force-cycle-archived))
- ((bound-and-true-p hs-minor-mode)
- (save-excursion
- (end-of-line)
- (hs-toggle-hiding)))
-
- ((bound-and-true-p outline-minor-mode)
- (save-excursion
- (outline-cycle)))))
-
- (bind-key "<tab>" #'malb/indent-fold-or-complete)
- (bind-key "C-<tab>" #'malb/toggle-fold)
+ ((bound-and-true-p hs-minor-mode)
+ (save-excursion (end-of-line) (hs-toggle-hiding)))
+ ((bound-and-true-p outline-minor-mode)
+ (save-excursion (outline-cycle)))))
+
+ ;; by default just call whatever was bound
+ (t
+ (let ((fn (or (if (current-local-map) (lookup-key (current-local-map) (kbd "TAB")))
+ 'indent-for-tab-command)))
+ (if (not (called-interactively-p 'any))
+ (fn arg)
+ (setq this-command fn)
+ (call-interactively fn))))))
+
+(defun malb/toggle-fold ()
+ (interactive)
+ (cond ((eq major-mode 'org-mode)
+ (org-force-cycle-archived))
+ ((bound-and-true-p hs-minor-mode)
+ (save-excursion
+ (end-of-line)
+ (hs-toggle-hiding)))
+
+ ((bound-and-true-p outline-minor-mode)
+ (save-excursion
+ (outline-cycle)))))
+
+(bind-key "<tab>" #'malb/indent-fold-or-complete)
+(bind-key "C-<tab>" #'malb/toggle-fold)
#+END_SRC
** Tinyprocmail
:load-path "~/lib/emacs_el/magit-annex/"
)
(use-package magit-vcsh
- :ensure f ; currently not in melpa, so don't try to install
- :load-path "~/lib/emacs_el/magit-vcsh/"
+ :ensure t
)
#+END_SRC
+*** Forge (github/gitlab)
+#+BEGIN_SRC emacs-lisp
+(use-package forge
+ :ensure t
+ :after magit
+ )
+#+END_SRC
+
** Perl
#+BEGIN_SRC emacs-lisp
(use-package cperl-mode
+ :ensure t
:config
(progn
;; Use c-mode for perl .xs files
#+END_SRC
** SQL mode
#+BEGIN_SRC emacs-lisp
- ; load sql-indent when sql is loaded
+; load sql-indent when sql is loaded
+(use-package sql-indent
+ :ensure t
+ :hook sql-mode
+ )
(use-package sql
+ :ensure t
:mode (("\\.sql\\'" . sql-mode))
- :config
- (require sql-indent))
+ )
#+END_SRC
** Ediff
#+BEGIN_SRC emacs-lisp
)
#+END_SRC
-** Helm
+** Vertico
#+BEGIN_SRC emacs-lisp
- (defun malb/helm-omni (&rest arg)
- ;; just in case someone decides to pass an argument, helm-omni won't fail.
- (interactive)
- (unless helm-source-buffers-list
- (setq helm-source-buffers-list
- (helm-make-source "Buffers" 'helm-source-buffers)))
- (helm-other-buffer
- (append
-
- (if (projectile-project-p)
- '(helm-source-projectile-buffers-list
- helm-source-buffers-list)
- '(helm-source-buffers-list)) ;; list of all open buffers
-
- `(((name . "Virtual Workspace")
- (candidates . ,(--map (cons (eyebrowse-format-slot it) (car it))
- (eyebrowse--get 'window-configs)))
- (action . (lambda (candidate)
- (eyebrowse-switch-to-window-config candidate)))))
-
- (if (projectile-project-p)
- '(helm-source-projectile-recentf-list
- helm-source-recentf)
- '(helm-source-recentf)) ;; all recent files
-
- ;; always make some common files easily accessible
- ;;'(((name . "Common Files")
- ;; (candidates . malb/common-file-targets)
- ;; (action . (("Open" . (lambda (x) (find-file (eval x))))))))
-
- '(helm-source-files-in-current-dir
- helm-source-locate
- helm-source-bookmarks
- helm-source-buffer-not-found ;; ask to create a buffer otherwise
- ))
- "*Helm all the things*"))
- (use-package helm
- :ensure helm
- :diminish helm-mode
- :bind (("M-x" . helm-M-x)
- ("C-x C-f" . helm-find-files)
- ("C-x b" . helm-buffers-list) ; malb/helm-omni)
- ("C-x C-b" . helm-buffers-list) ; malb/helm-omni)
- ("C-c <SPC>" . helm-all-mark-rings))
- :config
- (require 'helm-config)
- (require 'helm-for-files)
- (require 'helm-bookmark)
-
- (helm-mode 1)
- (define-key global-map [remap find-file] 'helm-find-files)
- (define-key global-map [remap occur] 'helm-occur)
- (define-key global-map [remap list-buffers] 'helm-buffers-list)
- (define-key global-map [remap dabbrev-expand] 'helm-dabbrev)
- (unless (boundp 'completion-in-region-function)
- (define-key lisp-interaction-mode-map [remap completion-at-point] 'helm-lisp-completion-at-point)
- (define-key emacs-lisp-mode-map [remap completion-at-point] 'helm-lisp-completion-at-point))
- (add-hook 'kill-emacs-hook #'(lambda () (and (file-exists-p "$TMP") (delete-file "$TMP"))))
+(use-package vertico
+ :ensure t
+ :init
+ (vertico-mode)
+
+ ;; Different scroll margin
+ ;; (setq vertico-scroll-margin 0)
+
+ ;; Show more candidates
+ ;; (setq vertico-count 20)
+
+ ;; Grow and shrink the Vertico minibuffer
+ ;; (setq vertico-resize t)
+
+ ;; Optionally enable cycling for `vertico-next' and `vertico-previous'.
+ ;; (setq vertico-cycle t)
+ :config
+ (define-key vertico-map "\r" #'vertico-directory-enter)
+ (define-key vertico-map "\d" #'vertico-directory-delete-char)
+ (define-key vertico-map "\M-\d" #'vertico-directory-delete-word)
+ (add-hook 'rfn-eshadow-update-overlay-hook #'vertico-directory-tidy
)
-#+END_SRC
-*** Helm Flx
-
- [[https://github.com/PythonNut/helm-flx][helm-flx]] implements intelligent helm fuzzy sorting, provided by [[https://github.com/lewang/flx][flx]].
-
- #+BEGIN_SRC emacs-lisp
- (use-package helm-flx
- :ensure t
- :config (progn
- ;; these are helm configs, but they kind of fit here nicely
- (setq helm-M-x-fuzzy-match t
- helm-bookmark-show-location t
- helm-buffers-fuzzy-matching t
- helm-completion-in-region-fuzzy-match t
- helm-file-cache-fuzzy-match t
- helm-imenu-fuzzy-match t
- helm-mode-fuzzy-match t
- helm-locate-fuzzy-match nil
- helm-quick-update t
- helm-recentf-fuzzy-match nil
- helm-semantic-fuzzy-match t)
- (helm-flx-mode +1)))
- #+END_SRC
-*** Helm Swoop
-#+BEGIN_SRC emacs-lisp
-
- ;;; stolen from https://github.com/malb/emacs.d/blob/master/malb.org
- (defun malb/helm-swoop-pre-fill ()
- (thing-at-point 'symbol))
- (defvar malb/helm-swoop-ignore-major-mode "List of major modes to ignore for helm-swoop")
- (setq malb/helm-swoop-ignore-major-mode '(dired-mode
- paradox-menu-mode doc-view-mode pdf-view-mode
- mu4e-headers-mode org-mode markdown-mode latex-mode
- ein:notebook-multilang-mode))
-
- (defun malb/swoop-or-search ()
- (interactive)
- (if (or (> (buffer-size) 1048576) ;; helm-swoop can be slow on big buffers
- (memq major-mode malb/helm-swoop-ignore-major-mode))
- (isearch-forward)
- (helm-swoop)))
-
- (use-package helm-swoop
- :ensure t
- :commands helm-swoop
- :bind (("C-c o" . helm-multi-swoop-org)
- ("C-s" . malb/swoop-or-search)
- ("C-M-s" . helm-multi-swoop-all))
- :config (progn
-
- (setq helm-swoop-pre-input-function #'malb/helm-swoop-pre-fill
- helm-swoop-split-with-multiple-windows nil
- helm-swoop-split-direction #'split-window-horizontally
- helm-swoop-split-window-function 'helm-default-display-buffer
- helm-swoop-speed-or-color t)
-
- ;; https://emacs.stackexchange.com/questions/28790/helm-swoop-how-to-make-it-behave-more-like-isearch
- (defun malb/helm-swoop-C-s ()
- (interactive)
- (if (boundp 'helm-swoop-pattern)
- (if (equal helm-swoop-pattern "")
- (previous-history-element 1)
- (helm-next-line))
- (helm-next-line)))
-
- (bind-key "C-S-s" #'helm-swoop-from-isearch isearch-mode-map)
- (bind-key "C-S-s" #'helm-multi-swoop-all-from-helm-swoop helm-swoop-map)
- (bind-key "C-r" #'helm-previous-line helm-swoop-map)
- (bind-key "C-s" #'malb/helm-swoop-C-s helm-swoop-map)
- (bind-key "C-r" #'helm-previous-line helm-multi-swoop-map)
- (bind-key "C-s" #'malb/helm-swoop-C-s helm-multi-swoop-map))
- )
-#+END_SRC
-*** Helm Ag
-#+BEGIN_SRC emacs-lisp
-(use-package helm-ag
+;; Persist history over Emacs restarts. Vertico sorts by history position.
+(use-package savehist
:ensure t
- :config (setq helm-ag-base-command "ag --nocolor --nogroup"
- helm-ag-command-option "--all-text"
- helm-ag-insert-at-point 'symbol
- helm-ag-fuzzy-match t
- helm-ag-use-temp-buffer t
- helm-ag-use-grep-ignore-list t
- helm-ag-use-agignore t))
-#+END_SRC
-*** Helm Descbinds
-#+BEGIN_SRC emacs-lisp
- (use-package helm-descbinds
- :ensure t
- :bind ("C-h b" . helm-descbinds)
- :init (fset 'describe-bindings 'helm-descbinds))
-#+END_SRC
+ :init
+ (savehist-mode))
-*** Helm YaSnippet
-#+BEGIN_SRC emacs-lisp
- (use-package helm-c-yasnippet
- :ensure t
- :bind ("C-c h y" . helm-yas-complete)
- :config (progn
- (setq helm-yas-space-match-any-greedy t)))
#+END_SRC
-*** Helm Org Rifle
-#+BEGIN_SRC emacs-lisp
- (use-package helm-org-rifle
- :ensure t
- :config (progn
- (defun malb/helm-org-rifle-agenda-files (arg)
- (interactive "p")
- (let ((current-prefix-arg nil))
- (cond
- ((equal arg 4) (call-interactively #'helm-org-rifle-agenda-files nil))
- ((equal arg 16) (helm-org-rifle-occur-agenda-files))
- (t (helm-org-agenda-files-headings)))))))
-#+END_SRC
-*** Helm Google
-This can be used to link things pretty quickly if necessary
-#+BEGIN_SRC emacs-lisp
- (use-package helm-google
- :ensure t
- :bind ("C-c h g" . helm-google)
- :config
- (progn (add-to-list 'helm-google-actions
- '("Copy URL" . (lambda (candidate)
- (let ((url
- (replace-regexp-in-string
- "https://.*q=\\(.*\\)\&sa=.*"
- "\\1" candidate)))
- (kill-new url))))
- t
- )
-
- (add-to-list 'helm-google-actions
- '("Org Store Link" . (lambda (candidate)
- (let ((title (car (split-string candidate "[\n]+")))
- (url
- (replace-regexp-in-string
- "https://.*q=\\(.*\\)\&sa=.*"
- "\\1" candidate)))
- (push (list url title) org-stored-links))))
- t)
- ))
-#+END_SRC
-
-** Projectile -- Project management
+** Orderless: advanced completion style
#+begin_src emacs-lisp
- (use-package projectile
- :ensure t
- :bind (("<f5>" . projectile-compile-project)
- ("<f6>" . next-error))
- :config (progn
- (use-package magit :ensure t)
- (require 'helm-projectile)
- (helm-projectile-on)
+(use-package orderless
+ :ensure t
+ :init
+ ;; Configure a custom style dispatcher (see the Consult wiki)
+ ;; (setq orderless-style-dispatchers '(+orderless-dispatch)
+ ;; orderless-component-separator #'orderless-escapable-split-on-space)
+ (setq completion-styles '(orderless basic)
+ completion-category-defaults nil
+ completion-category-overrides '((file (styles partial-completion)))))
+#+end_src
+** Marginalia: Rich annotations in the minibuffer
+#+begin_src emacs-lisp
+(use-package marginalia
+ :ensure t
+ :bind (("M-A" . marginalia-cycle)
+ :map minibuffer-local-map
+ ("M-A" . marginalia-cycle))
+ :init
+ (marginalia-mode)
+ )
+#+end_src
+** Embark: Minibuffer actions and context menu
+#+begin_src emacs-lisp
+(use-package embark
+ :ensure t
+
+ :bind
+ (("C-." . embark-act) ;; pick some comfortable binding
+ ("C-;" . embark-dwim) ;; good alternative: M-.
+ ("C-h B" . embark-bindings)) ;; alternative for `describe-bindings'
+
+ :init
- (setq projectile-make-test-cmd "make check"
- projectile-switch-project-action 'helm-projectile
- projectile-mode-line '(:eval (format "»{%s}" (projectile-project-name))))
+ ;; Optionally replace the key help with a completing-read interface
+ (setq prefix-help-command #'embark-prefix-help-command)
+
+ :config
+
+ ;; Hide the mode line of the Embark live/completions buffers
+ (add-to-list 'display-buffer-alist
+ '("\\`\\*Embark Collect \\(Live\\|Completions\\)\\*"
+ nil
+ (window-parameters (mode-line-format . none)))))
- (projectile-global-mode)))
+(use-package embark-consult
+ :ensure t
+ :hook
+ (embark-collect-mode . consult-preview-at-point-mode))
#+end_src
+** Consult
+#+begin_src emacs-lisp
+(use-package consult
+ ;; Replace bindings. Lazily loaded due by `use-package'.
+ :bind (;; C-c bindings (mode-specific-map)
+ ("C-c h" . consult-history)
+ ("C-c m" . consult-mode-command)
+ ("C-c k" . consult-kmacro)
+ ;; C-x bindings (ctl-x-map)
+ ("C-x M-:" . consult-complex-command) ;; orig. repeat-complex-command
+ ("C-x b" . consult-buffer) ;; orig. switch-to-buffer
+ ("C-x 4 b" . consult-buffer-other-window) ;; orig. switch-to-buffer-other-window
+ ("C-x 5 b" . consult-buffer-other-frame) ;; orig. switch-to-buffer-other-frame
+ ("C-x r b" . consult-bookmark) ;; orig. bookmark-jump
+ ; ("C-x p b" . consult-project-buffer) ;; orig. project-switch-to-buffer
+ ;; Custom M-# bindings for fast register access
+ ("M-#" . consult-register-load)
+ ("M-'" . consult-register-store) ;; orig. abbrev-prefix-mark (unrelated)
+ ("C-M-#" . consult-register)
+ ;; Other custom bindings
+ ("M-y" . consult-yank-pop) ;; orig. yank-pop
+ ;; M-g bindings (goto-map)
+ ("M-g e" . consult-compile-error)
+ ("M-g f" . consult-flymake) ;; Alternative: consult-flycheck
+ ("M-g g" . consult-goto-line) ;; orig. goto-line
+ ("M-g M-g" . consult-goto-line) ;; orig. goto-line
+ ("M-g o" . consult-outline) ;; Alternative: consult-org-heading
+ ("M-g m" . consult-mark)
+ ("M-g k" . consult-global-mark)
+ ("M-g i" . consult-imenu)
+ ("M-g I" . consult-imenu-multi)
+ ;; M-s bindings (search-map)
+ ("M-s d" . consult-find)
+ ("M-s D" . consult-locate)
+ ("M-s g" . consult-grep)
+ ("M-s G" . consult-git-grep)
+ ("M-s r" . consult-ripgrep)
+ ("M-s l" . consult-line)
+ ("M-s L" . consult-line-multi)
+ ("M-s k" . consult-keep-lines)
+ ("M-s u" . consult-focus-lines)
+ ;; Isearch integration
+ ("M-s e" . consult-isearch-history)
+ :map isearch-mode-map
+ ("M-e" . consult-isearch-history) ;; orig. isearch-edit-string
+ ("M-s e" . consult-isearch-history) ;; orig. isearch-edit-string
+ ("M-s l" . consult-line) ;; needed by consult-line to detect isearch
+ ("M-s L" . consult-line-multi) ;; needed by consult-line to detect isearch
+ ;; Minibuffer history
+ :map minibuffer-local-map
+ ("M-s" . consult-history) ;; orig. next-matching-history-element
+ ("M-r" . consult-history)) ;; orig. previous-matching-history-element
+
+ ;; Enable automatic preview at point in the *Completions* buffer. This is
+ ;; relevant when you use the default completion UI.
+ :hook (completion-list-mode . consult-preview-at-point-mode)
+
+ ;; The :init configuration is always executed (Not lazy)
+ :init
+
+ ;; Optionally configure the register formatting. This improves the register
+ ;; preview for `consult-register', `consult-register-load',
+ ;; `consult-register-store' and the Emacs built-ins.
+ (setq register-preview-delay 0.5
+ register-preview-function #'consult-register-format)
+
+ ;; Optionally tweak the register preview window.
+ ;; This adds thin lines, sorting and hides the mode line of the window.
+ (advice-add #'register-preview :override #'consult-register-window)
+
+ ;; Use Consult to select xref locations with preview
+ (setq xref-show-xrefs-function #'consult-xref
+ xref-show-definitions-function #'consult-xref)
+
+ ;; Configure other variables and modes in the :config section,
+ ;; after lazily loading the package.
+ :config
-*** helm integration
+ ;; Optionally configure preview. The default value
+ ;; is 'any, such that any key triggers the preview.
+ ;; (setq consult-preview-key 'any)
+ ;; (setq consult-preview-key (kbd "M-."))
+ ;; (setq consult-preview-key (list (kbd "<S-down>") (kbd "<S-up>")))
+ ;; For some commands and buffer sources it is useful to configure the
+ ;; :preview-key on a per-command basis using the `consult-customize' macro.
+ (consult-customize
+ consult-theme :preview-key '(:debounce 0.2 any)
+ consult-ripgrep consult-git-grep consult-grep
+ consult-bookmark consult-recent-file consult-xref
+ consult--source-bookmark consult--source-file-register
+ consult--source-recent-file consult--source-project-recent-file
+ ;; :preview-key (kbd "M-.")
+ :preview-key '(:debounce 0.4 any))
+
+ ;; Optionally configure the narrowing key.
+ ;; Both < and C-+ work reasonably well.
+ (setq consult-narrow-key "<") ;; (kbd "C-+")
+
+ ;; Optionally make narrowing help available in the minibuffer.
+ ;; You may want to use `embark-prefix-help-command' or which-key instead.
+ ;; (define-key consult-narrow-map (vconcat consult-narrow-key "?") #'consult-narrow-help)
+
+ ;; By default `consult-project-function' uses `project-root' from project.el.
+ ;; Optionally configure a different project root function.
+ ;; There are multiple reasonable alternatives to chose from.
+ ;;;; 1. project.el (the default)
+ ;; (setq consult-project-function #'consult--default-project--function)
+ ;;;; 2. projectile.el (projectile-project-root)
+ ;; (autoload 'projectile-project-root "projectile")
+ ;; (setq consult-project-function (lambda (_) (projectile-project-root)))
+ ;;;; 3. vc.el (vc-root-dir)
+ ;; (setq consult-project-function (lambda (_) (vc-root-dir)))
+ ;;;; 4. locate-dominating-file
+ ;; (setq consult-project-function (lambda (_) (locate-dominating-file "." ".git")))
+)
+#+end_src
+** Projectile -- Project management
#+begin_src emacs-lisp
- (use-package helm-projectile
- :ensure t
- :config (progn
- (defvar malb/helm-source-file-not-found
- (helm-build-dummy-source
- "Create file"
- :action 'find-file))
-
- (add-to-list
- 'helm-projectile-sources-list
- malb/helm-source-file-not-found t)
-
- (helm-delete-action-from-source
- "Grep in projects `C-s'"
- helm-source-projectile-projects)
-
- (helm-add-action-to-source
- "Grep in projects `C-s'"
- 'helm-do-ag helm-source-projectile-projects 4)))
+(use-package projectile
+ :ensure t
+ :bind (("<f5>" . projectile-compile-project)
+ ("<f6>" . next-error))
+ :config (progn
+ (use-package magit :ensure t)
+ (projectile-global-mode)))
#+end_src
+
** Zap to char
#+BEGIN_SRC emacs-lisp
(use-package avy-zap
("o" (find-file "~/projects/org-notes/ool.org"))
("f" (find-file "~/projects/org-notes/fh.org"))
("s" (find-file "~/projects/org-notes/sndservers.org"))
- ("r" (find-file "~/projects/org-notes/refile.org"))
+ ("r" (find-file my/org-refile-file))
("p" (find-file "~/projects/research/papers_to_read.org"))
("R" (find-file "~/projects/research/paper_notes.org"))
("h" (find-file "~/projects/org-notes/hpcbio.org"))
#+END_SRC
** LaTeX
#+BEGIN_SRC emacs-lisp
- (use-package tex
- :defer t
- :ensure auctex
+(use-package tex
+ :defer t
+ :ensure auctex
+ :config
+ ; (add-to-list 'TeX-style-path '"/home/don/lib/emacs_el/auctex/style")
+ ;; REFTEX (much enhanced management of cross-ref, labels, etc)
+ ;; http://www.strw.leidenuniv.nl/~dominik/Tools/reftex/
+ ; (autoload 'reftex-mode "reftex" "RefTeX Minor Mode" t)
+ ; (autoload 'turn-on-reftex "reftex" "RefTeX Minor Mode" nil)
+ ; (autoload 'reftex-citation "reftex-cite" "Make citation" nil)
+ ; (autoload 'reftex-index-phrase-mode "reftex-index" "Phrase mode" t)
+ (add-hook 'LaTeX-mode-hook 'turn-on-reftex) ; with AUCTeX LaTeX mode
+ (add-hook 'latex-mode-hook 'turn-on-reftex) ; with Emacs latex mode
+ (add-hook 'LaTeX-mode-hook 'outline-minor-mode) ; with AUCTeX LaTeX mode
+ (add-hook 'latex-mode-hook 'outline-minor-mode) ; with Emacs latex mode
+
+ (setq-default reftex-plug-into-AUCTeX t)
+ ;; support fake section headers
+ (setq TeX-outline-extra
+ '(("%chapter" 1)
+ ("%section" 2)
+ ("%subsection" 3)
+ ("%subsubsection" 4)
+ ("%paragraph" 5)))
+ ;; add font locking to the headers
+ (font-lock-add-keywords
+ 'latex-mode
+ '(("^%\\(chapter\\|\\(sub\\|subsub\\)?section\\|paragraph\\)"
+ 0 'font-lock-keyword-face t)
+ ("^%chapter{\\(.*\\)}" 1 'font-latex-sectioning-1-face t)
+ ("^%section{\\(.*\\)}" 1 'font-latex-sectioning-2-face t)
+ ("^%subsection{\\(.*\\)}" 1 'font-latex-sectioning-3-face t)
+ ("^%subsubsection{\\(.*\\)}" 1 'font-latex-sectioning-4-face t)
+ ("^%paragraph{\\(.*\\)}" 1 'font-latex-sectioning-5-face t)))
+
+ ;; use smart quotes by default instead of `` and ''
+ ;; taken from http://kieranhealy.org/esk/kjhealy.html
+ (setq TeX-open-quote "“")
+ (setq TeX-close-quote "”")
+
+ ;; (TeX-add-style-hook
+ ;; "latex"
+ ;; (lambda ()
+ ;; (TeX-add-symbols
+ ;; '("DLA" 1))))
+ ;; (custom-set-variables
+ ;; '(font-latex-user-keyword-classes
+ ;; '(("fixme"
+ ;; ("DLA" "RZ")
+ ;; font-lock-function-name-face 2 (command 1 t))))
+ ;; )
+ (setq-default TeX-parse-self t)
+ (setq-default TeX-auto-save t)
+ (setq-default TeX-master nil)
+ (add-to-list 'LaTeX-font-list
+ '(?\C-a "\\alert{","}"))
+ (eval-after-load
+ "latex"
+ '(TeX-add-style-hook
+ "cleveref"
+ (lambda ()
+ (if (boundp 'reftex-ref-style-alist)
+ (add-to-list
+ 'reftex-ref-style-alist
+ '("Cleveref" "cleveref"
+ (("\\cref" ?c) ("\\Cref" ?C) ("\\cpageref" ?d) ("\\Cpageref" ?D)))))
+ (reftex-ref-style-activate "Cleveref")
+ (TeX-add-symbols
+ '("cref" TeX-arg-ref)
+ '("Cref" TeX-arg-ref)
+ '("cpageref" TeX-arg-ref)
+ '("Cpageref" TeX-arg-ref)))))
+ (eval-after-load
+ "latex"
+ '(add-to-list 'LaTeX-fill-excluded-macros
+ '("Sexpr")))
+
+ (use-package font-latex
:config
- ; (add-to-list 'TeX-style-path '"/home/don/lib/emacs_el/auctex/style")
- ;; REFTEX (much enhanced management of cross-ref, labels, etc)
- ;; http://www.strw.leidenuniv.nl/~dominik/Tools/reftex/
- ; (autoload 'reftex-mode "reftex" "RefTeX Minor Mode" t)
- ; (autoload 'turn-on-reftex "reftex" "RefTeX Minor Mode" nil)
- ; (autoload 'reftex-citation "reftex-cite" "Make citation" nil)
- ; (autoload 'reftex-index-phrase-mode "reftex-index" "Phrase mode" t)
- (add-hook 'LaTeX-mode-hook 'turn-on-reftex) ; with AUCTeX LaTeX mode
- (add-hook 'latex-mode-hook 'turn-on-reftex) ; with Emacs latex mode
- (add-hook 'LaTeX-mode-hook 'outline-minor-mode) ; with AUCTeX LaTeX mode
- (add-hook 'latex-mode-hook 'outline-minor-mode) ; with Emacs latex mode
-
- (setq-default reftex-plug-into-AUCTeX t)
- ;; support fake section headers
- (setq TeX-outline-extra
- '(("%chapter" 1)
- ("%section" 2)
- ("%subsection" 3)
- ("%subsubsection" 4)
- ("%paragraph" 5)))
- ;; add font locking to the headers
- (font-lock-add-keywords
- 'latex-mode
- '(("^%\\(chapter\\|\\(sub\\|subsub\\)?section\\|paragraph\\)"
- 0 'font-lock-keyword-face t)
- ("^%chapter{\\(.*\\)}" 1 'font-latex-sectioning-1-face t)
- ("^%section{\\(.*\\)}" 1 'font-latex-sectioning-2-face t)
- ("^%subsection{\\(.*\\)}" 1 'font-latex-sectioning-3-face t)
- ("^%subsubsection{\\(.*\\)}" 1 'font-latex-sectioning-4-face t)
- ("^%paragraph{\\(.*\\)}" 1 'font-latex-sectioning-5-face t)))
-
- ;; use smart quotes by default instead of `` and ''
- ;; taken from http://kieranhealy.org/esk/kjhealy.html
- (setq TeX-open-quote "“")
- (setq TeX-close-quote "”")
-
- ;; (TeX-add-style-hook
- ;; "latex"
- ;; (lambda ()
- ;; (TeX-add-symbols
- ;; '("DLA" 1))))
- ;; (custom-set-variables
- ;; '(font-latex-user-keyword-classes
- ;; '(("fixme"
- ;; ("DLA" "RZ")
- ;; font-lock-function-name-face 2 (command 1 t))))
- ;; )
- (setq-default TeX-parse-self t)
- (setq-default TeX-auto-save t)
- (setq-default TeX-master nil)
- (eval-after-load
- "latex"
- '(TeX-add-style-hook
- "cleveref"
- (lambda ()
- (if (boundp 'reftex-ref-style-alist)
- (add-to-list
- 'reftex-ref-style-alist
- '("Cleveref" "cleveref"
- (("\\cref" ?c) ("\\Cref" ?C) ("\\cpageref" ?d) ("\\Cpageref" ?D)))))
- (reftex-ref-style-activate "Cleveref")
- (TeX-add-symbols
- '("cref" TeX-arg-ref)
- '("Cref" TeX-arg-ref)
- '("cpageref" TeX-arg-ref)
- '("Cpageref" TeX-arg-ref)))))
- (eval-after-load
- "latex"
- '(add-to-list 'LaTeX-fill-excluded-macros
- '("Sexpr")))
-
- (use-package font-latex
- :config
- (setq font-latex-match-reference-keywords
- '(
- ("fref" "{")
- ("Fref" "{")
- ("citep" "{")
- ("citet" "{")
- ("acs" "{")
- ("acsp" "{")
- ("ac" "{")
- ("acp" "{")
- ("acl" "{")
- ("aclp" "{")
- ("acsu" "{")
- ("aclu" "{")
- ("acused" "{")
- ("DLA" "{")
- ("RZ" "{")
- ("OM" "{")
- ("DL" "{")
- ("fixme" "{"))
- )
- )
- (setq font-latex-fontify-script nil)
- (setq font-latex-fontify-sectioning (quote color))
- (setq font-latex-script-display (quote (nil)))
- )
+ (setq font-latex-match-reference-keywords
+ '(
+ ("fref" "{")
+ ("Fref" "{")
+ ("citep" "{")
+ ("citet" "{")
+ ("acs" "{")
+ ("acsp" "{")
+ ("ac" "{")
+ ("acp" "{")
+ ("acl" "{")
+ ("aclp" "{")
+ ("acsu" "{")
+ ("aclu" "{")
+ ("acused" "{")
+ ("DLA" "{")
+ ("RZ" "{")
+ ("OM" "{")
+ ("DL" "{")
+ ("fixme" "{"))
+ )
+ )
+ (setq font-latex-fontify-script nil)
+ (setq font-latex-fontify-sectioning (quote color))
+ (setq font-latex-script-display (quote (nil)))
+)
#+END_SRC
** ESS
(defun dla/ess-region-remote-eval (start end)
"Evaluate region in a remote ESS instance"
(interactive "r")
- (shell-command-on-region start end "eval_r" (get-buffer-create "***essregionremoteeval***"))
- kill-buffer "***essregionremoteeval***")
+ (shell-command-on-region start end "eval_r" (get-buffer-create "***essregionremoteeval***") nil nil nil)
+ (kill-buffer "***essregionremoteeval***"))
;; Don't restore history or save workspace image
'(inferior-R-args "--no-restore-history --no-save")
)
)
#+END_SRC
+** YAML Mode
+#+BEGIN_SRC emacs-lisp
+ (use-package yaml-mode
+ ;; add ess to the x major mode
+ :mode ("\\.\\(yaml|yml\\)\\'" . yaml-mode)
+ )
+#+END_SRC
+
** Polymode
#+BEGIN_SRC emacs-lisp
(use-package poly-noweb
** Outlining
*** Outline magic
#+BEGIN_SRC emacs-lisp
- (use-package outline-magic)
+; this package doesn't really do exactly what we want it to do
+; (use-package outline-magic)
#+END_SRC
*** Outline mode
#+BEGIN_SRC emacs-lisp
(setq atomic-chrome-buffer-open-style 'full)
)
#+END_SRC
+** Edit Server
+#+BEGIN_SRC emacs-lisp
+ (use-package edit-server
+ :ensure t
+ :commands edit-server-start
+ :init (if after-init-time
+ (edit-server-start)
+ (add-hook 'after-init-hook
+ #'(lambda() (edit-server-start))))
+ :config (setq edit-server-new-frame-alist
+ '((name . "Edit with Emacs FRAME")
+ (top . 200)
+ (left . 200)
+ (width . 80)
+ (height . 25)
+ (minibuffer . t)
+ (menu-bar-lines . t)
+ (window-system . x)))
+ )
+#+END_SRC
** Multiple Cursors
- :PROPERTIES:
- :ID: 6fcf218b-a762-4c37-9339-a8202ddeb544
- :END:
[[https://github.com/magnars/multiple-cursors.el][Multiple Cursors]]
#+BEGIN_SRC emacs-lisp
(use-package multiple-cursors
#+BEGIN_SRC emacs-lisp
(use-package spamassassin-mode
:commands spamassassin-mode
- :ensure f
+ :ensure t
)
#+END_SRC
** Password Store
#+BEGIN_SRC emacs-lisp
(use-package password-store
- :ensure f
+ :ensure t
:commands password-store-edit password-store-generate
)
#+END_SRC
** Abbrev Mode
#+BEGIN_SRC emacs-lisp
(use-package abbrev
- :diminish abbrev-mode
+ :delight abbrev-mode
:config
;; load abbreviations from
(setq abbrev-file-name
(setq default-abbrev-mode t))
#+END_SRC
+** Debugging (realgud)
+#+BEGIN_SRC emacs-lisp
+(use-package realgud
+ :ensure t
+ )
+#+END_SRC
+** Python Programming
+#+BEGIN_SRC emacs-lisp
+(use-package python-mode
+ :delight 🐍
+ :hook
+ (python-mode . pyenv-mode)
+ (python-mode . flycheck-mode)
+ (python-mode . company-mode)
+ (python-mode . blacken-mode)
+ (python-mode . yas-minor-mode)
+ (python-mode . anaconda-mode)
+ )
+(use-package pyenv
+ :ensure t
+ )
+(use-package blacken
+ :delight ⚑
+ :init
+ (setq-default blacken-fast-unsafe t)
+ ; (setq-default blacken-line-length 80)
+ :ensure t)
+(use-package anaconda-mode
+ :ensure t
+ )
+
+(use-package elpy
+ :ensure t
+ :init
+ (elpy-enable)
+ )
+#+END_SRC
+*** Black
+#+begin_src emacs-lisp :tangle yes
+ (use-package python-black
+ :demand t
+ :after python)
+#+end_src
+*** Sphinx Documentation
+#+begin_src emacs-lisp :tangle yes
+ (use-package numpydoc
+ :ensure t
+ :after python
+ :bind (:map python-mode-map
+ ("C-c C-n" . numpydoc-generate)))
+ (use-package sphinx-doc
+ :ensure t
+ :config
+ (sphinx-doc-mode t)
+ (setq sphinx-doc-include-types t)
+ :after python)
+#+end_src
** Go language
#+BEGIN_SRC emacs-lisp
(use-package go-mode
- :diminish "go"
+ :delight "go"
:mode "\\.go"
)
#+END_SRC
)
#+END_SRC
+** Dockerfile
+#+BEGIN_SRC emacs-lisp
+(use-package dockerfile-mode
+ :mode "Dockerfile"
+ )
+#+END_SRC
+
+** Beancount
+#+BEGIN_SRC emacs-lisp
+(use-package beancount
+ :load-path "~/lib/emacs_el/beancount-mode/"
+ :ensure f
+ :mode "\\.beancount\\'"
+
+ )
+#+END_SRC
* Email
** Mutt
*** Message-mode
#+BEGIN_SRC emacs-lisp
(use-package message
:ensure f
- :diminish (message "✉")
+ :delight (message "✉")
:mode ("muttng-[a-z0-9]+-[0-9]+-" . message-mode)
:mode ("mutt-[a-z0-9]+-[0-9]+-" . message-mode)
:hook 'my/message-mode-settings
; org mode agenda files
(setq org-agenda-files
- (quote ("~/projects/org-notes/debbugs.org"
- "~/projects/org-notes/notes.org"
- "~/projects/org-notes/holidays.org"
- "~/projects/org-notes/refile.org"
- "~/projects/org-notes/diary.org"
- "~/projects/org-notes/ool.org"
- "~/projects/org-notes/sndservers.org"
- "~/projects/org-notes/chaim.org"
- "~/projects/org-notes/wildman.org"
- "~/projects/org-notes/uddin.org"
- "~/projects/org-notes/reviews.org"
- "~/projects/org-notes/laurel.org"
- "~/projects/org-notes/from-calendar.org"
- "~/org-mode/from-mobile.org"
- "~/projects/org-notes/fh.org")))
+ (append
+ (file-expand-wildcards "~/projects/org-notes/*.org")
+ (file-expand-wildcards "~/org-mode/from-mobile.org")
+ (file-expand-wildcards "~/org-notes-*/*.org")
+ )
+ )
+ (setq my/org-refile-file
+ (car (seq-filter
+ (lambda (file) (string-match-p (regexp-quote "/refile.org") file))
+ org-agenda-files)))
(set-register ?n (cons 'file "~/projects/org-notes/notes.org"))
- (set-register ?r (cons 'file "~/projects/org-notes/refile.org"))
+ (set-register ?r (cons 'file my/org-refile-file))
(set-register ?o (cons 'file "~/projects/org-notes/ool.org"))
(set-register ?s (cons 'file "~/projects/org-notes/sndservers.org"))
(set-register ?c (cons 'file "~/projects/org-notes/chaim.org"))
** Capture Templates
#+BEGIN_SRC emacs-lisp
(setq org-capture-templates ;; mail-specific note template, identified by "m"
- `(("m" "Mail" entry (file "~/projects/org-notes/refile.org")
+ `(("m" "Mail" entry (file my/org-refile-file)
"* %?\n\n Source: %u, [[%:link][%:description]]\n %:initial")
- ("t" "todo" entry (file "~/projects/org-notes/refile.org")
+ ("t" "todo" entry (file my/org-refile-file)
"* TODO %?\n :PROPERTIES:\n :END:\n :LOGBOOK:\n :END:\n%U\n%a\n" :clock-in t :clock-resume t)
- ("r" "respond" entry (file "~/projects/org-notes/refile.org")
+ ("r" "respond" entry (file my/org-refile-file)
"* NEXT Respond to %:from on %:subject\nSCHEDULED: %t\n%U\n%a\n" :clock-in t :clock-resume t :immediate-finish t)
- ("n" "note" entry (file "~/projects/org-notes/refile.org")
+ ("n" "note" entry (file my/org-refile-file)
"* %? :NOTE:\n%U\n%a\n" :clock-in t :clock-resume t)
- ("s" "schedule" entry (file "~/projects/org-notes/refile.org")
+ ("s" "schedule" entry (file my/org-refile-file)
"* %? :cal:\n%^{scheduled:}t\n%U\n%a\n" :clock-in t :clock-resume t)
("j" "Journal" entry (file+datetree "~/projects/org-notes/diary.org")
"* %?\n%U\n" :clock-in t :clock-resume t)
- ("w" "org-protocol" entry (file "~/projects/org-notes/refile.org")
+ ("w" "org-protocol" entry (file my/org-refile-file)
"* TODO Review %c\n%U\n" :immediate-finish t)
- ("M" "Meeting" entry (file "~/projects/org-notes/refile.org")
+ ("M" "Meeting" entry (file my/org-refile-file)
"* MEETING with %? :MEETING:\n%U" :clock-in t :clock-resume t)
- ("S" "Seminar" entry (file "~/projects/org-notes/refile.org")
+ ("S" "Seminar" entry (file my/org-refile-file)
"* SEMINAR notes %? :SEMINAR:\n%U" :clock-in t :clock-resume t)
("P" "Paper to read" entry (file+headline "~/projects/research/papers_to_read.org" "Refile")
"* TODO Get/Read %? \n%U" :clock-in t :clock-resume t)
- ("p" "Phone call" entry (file "~/projects/org-notes/refile.org")
+ ("p" "Phone call" entry (file my/org-refile-file)
"* PHONE %? :PHONE:\n%U" :clock-in t :clock-resume t)
("J" "job" entry (file+olp "~/projects/org-notes/notes.org"
"Jobs"
,(format-time-string "Positions %Y"))
"* TODO Apply for %? :job:\nSCHEDULED: <%<%Y-%m-%d>>\n%U\n%x\n" :clock-in t :clock-resume t)
- ("h" "Habit" entry (file "~/projects/org-notes/refile.org")
+ ("h" "Habit" entry (file my/org-refile-file)
"* NEXT %?\n%U\n%a\nSCHEDULED: %(format-time-string \"<%Y-%m-%d .+1d/3d>\")\n:PROPERTIES:\n:STYLE: habit\n:REPEAT_TO_STATE: NEXT\n:END:\n%a\n")
)
)
(interactive)
(save-excursion
(org-back-to-heading 'invisible-ok)
- (hide-other)
+ (outline-hide-other)
(org-cycle)
(org-cycle)
(org-cycle)))
(setq org-use-fast-todo-selection t)
(setq org-treat-S-cursor-todo-selection-as-state-change nil)
- ; create function to create headlines in file. This comes from
- ; http://stackoverflow.com/questions/13340616/assign-ids-to-every-entry-in-org-mode
- (defun my/org-add-ids-to-headlines-in-file ()
- "Add ID properties to all headlines in the current file which
- do not already have one."
- (interactive)
- (org-map-entries 'org-id-get-create))
- (defun dla/org-update-ids-to-headlines-in-file ()
- "Add or replace ID properties to all headlines in the current file
- (or narrowed region)."
- (interactive)
- (org-map-entries '(lambda () (org-id-get-create t))))
- ; if we wanted to do this to every buffer, do the following:
- ; (add-hook 'org-mode-hook
- ; (lambda ()
- ; (add-hook 'before-save-hook 'my/org-add-ids-to-headlines-in-file nil 'local)))
+; create function to create headlines in file. This comes from
+; http://stackoverflow.com/questions/13340616/assign-ids-to-every-entry-in-org-mode
+(defun my/org-add-ids-to-headlines-in-file ()
+ "Add ID properties to all headlines in the current file which
+do not already have one."
+ (interactive)
+ (save-excursion
+ (widen)
+ (goto-char (point-min))
+ (when (not (re-search-forward "^#\\+OPTIONS:.*auto-id:f" (point-max) t))
+ (org-map-entries 'org-id-get-create))))
+(defun dla/org-update-ids-to-headlines-in-file ()
+ "Add or replace ID properties to all headlines in the current file
+(or narrowed region)."
+ (interactive)
+
+ (org-map-entries '(lambda () (org-id-get-create t))))
+; if we wanted to do this to every buffer, do the following:
+(add-hook 'org-mode-hook
+ (lambda ()
+ (add-hook 'before-save-hook 'my/org-add-ids-to-headlines-in-file nil 'local)))
#+END_SRC
** Org ID locations
#+BEGIN_SRC emacs-lisp
#+END_SRC
** Keywords (TODO)
#+BEGIN_SRC emacs-lisp
- (setq org-todo-keywords
- (quote ((sequence "TODO(t)" "NEXT(n)" "|" "DONE(d)")
- (sequence "WAITING(w@/!)" "HOLD(h@/!)" "|" "CANCELLED(c@/!)" "PHONE" "MEETING"))))
-
- (setq org-todo-keyword-faces
- (quote (("TODO" :foreground "red" :weight bold)
- ("NEXT" :foreground "blue" :weight bold)
- ("DONE" :foreground "forest green" :weight bold)
- ("WAITING" :foreground "orange" :weight bold)
- ("HOLD" :foreground "magenta" :weight bold)
- ("CANCELLED" :foreground "forest green" :weight bold)
- ("MEETING" :foreground "forest green" :weight bold)
- ("PHONE" :foreground "forest green" :weight bold))))
-
- (setq org-todo-state-tags-triggers
- (quote (("CANCELLED" ("CANCELLED" . t))
- ("WAITING" ("WAITING" . t))
- ("HOLD" ("WAITING") ("HOLD" . t))
- (done ("WAITING") ("HOLD"))
- ("TODO" ("WAITING") ("CANCELLED") ("HOLD"))
- ("NEXT" ("WAITING") ("CANCELLED") ("HOLD"))
- ("DONE" ("WAITING") ("CANCELLED") ("HOLD")))))
-
-
-
- ; (add-hook 'org-clock-out-hook 'bh/remove-empty-drawer-on-clock-out 'append)
- ; add ids on creation of nodes
- (add-hook 'org-capture-prepare-finalize-hook 'my/org-add-id)
-
-
- ; resolve clocks after 10 minutes of idle; use xprintidle
- ; (setq org-clock-idle-time 10)
- ; (setq org-clock-x11idle-program-name "xprintidle")
-
- ; this is from http://doc.norang.ca/org-mode.html#Capture
- ; use C-M-r for org mode capture
- (global-set-key (kbd "C-M-r") 'org-capture)
-
- ; Targets include this file and any file contributing to the agenda - up to 9 levels deep
- (setq org-refile-targets (quote ((nil :maxlevel . 9)
- (org-agenda-files :maxlevel . 9))))
-
- ; Use full outline paths for refile targets - we file directly with IDO
- (setq org-refile-use-outline-path t)
-
- ; Targets complete directly with IDO
- (setq org-outline-path-complete-in-steps nil)
-
- ; Allow refile to create parent tasks with confirmation
- (setq org-refile-allow-creating-parent-nodes (quote confirm))
-
- ; ; Use IDO for both buffer and file completion and ido-everywhere to t
- ; (setq org-completion-use-ido t)
- ; (setq ido-everywhere t)
- ; (setq ido-max-directory-size 100000)
- ; (ido-mode (quote both))
- ; ; Use the current window when visiting files and buffers with ido
- ; (setq ido-default-file-method 'selected-window)
- ; (setq ido-default-buffer-method 'selected-window)
- ; ; Use the current window for indirect buffer display
- ; (setq org-indirect-buffer-display 'current-window)
-
-
- ;;;; Refile settings
- ; Exclude DONE state tasks from refile targets
- (defun bh/verify-refile-target ()
- "Exclude todo keywords with a done state from refile targets"
- (not (member (nth 2 (org-heading-components)) org-done-keywords)))
-
- (setq org-refile-target-verify-function 'bh/verify-refile-target)
-
- ;; ensure that emacsclient will show just the note to be edited when invoked
- ;; from Mutt, and that it will shut down emacsclient once finished;
- ;; fallback to legacy behavior when not invoked via org-protocol.
- (require 'org-protocol)
- ; (add-hook 'org-capture-mode-hook 'delete-other-windows)
- (setq my-org-protocol-flag nil)
- (defadvice org-capture-finalize (after delete-frame-at-end activate)
- "Delete frame at remember finalization"
- (progn (if my-org-protocol-flag (delete-frame))
- (setq my-org-protocol-flag nil)))
- (defadvice org-capture-refile (around delete-frame-after-refile activate)
- "Delete frame at remember refile"
- (if my-org-protocol-flag
- (progn
- (setq my-org-protocol-flag nil)
- ad-do-it
- (delete-frame))
- ad-do-it)
- )
- (defadvice org-capture-kill (after delete-frame-at-end activate)
- "Delete frame at remember abort"
- (progn (if my-org-protocol-flag (delete-frame))
- (setq my-org-protocol-flag nil)))
- (defadvice org-protocol-capture (before set-org-protocol-flag activate)
- (setq my-org-protocol-flag t))
-
- (defadvice org-insert-todo-heading (after dla/create-id activate)
- (unless (org-in-item-p)
- (org-id-get-create)
- )
- )
-
- ;; org modules
- (add-to-list 'org-modules 'org-habit)
-
- ; this comes from http://upsilon.cc/~zack/blog/posts/2010/02/integrating_Mutt_with_Org-mode/
- (defun open-mail-in-mutt (message)
- "Open a mail message in Mutt, using an external terminal.
-
- Message can be specified either by a path pointing inside a
- Maildir, or by Message-ID."
- (interactive "MPath or Message-ID: ")
- (shell-command
- (format "faf xterm -e \"%s %s\""
- (substitute-in-file-name "$HOME/bin/mutt_open") message)))
-
- ;; add support for "mutt:ID" links
- (org-add-link-type "mutt" 'open-mail-in-mutt)
-
- (defun my-org-mode-setup ()
- ; (load-library "reftex")
- (and (buffer-file-name)
- (file-exists-p (buffer-file-name))
- (progn
- ; (reftex-parse-all)
- (reftex-set-cite-format
- '((?b . "[[bib:%l][%l-bib]]")
- (?n . "[[notes:%l][%l-notes]]")
- (?c . "\\cite{%l}")
- (?h . "*** %t\n:PROPERTIES:\n:Custom_ID: %l\n:END:\n[[papers:%l][%l xoj]] [[papers-pdf:%l][pdf]]")))
- ))
- (define-key org-mode-map (kbd "C-c )") 'reftex-citation)
- (define-key org-mode-map (kbd "C-c [") 'reftex-citation)
- (define-key org-mode-map (kbd "C-c (") 'org-mode-reftex-search)
- (define-key org-mode-map (kbd "C-c 0") 'reftex-view-crossref)
+(setq org-todo-keywords
+ (quote ((sequence "TODO(t)" "NEXT(n)" "|" "DONE(d)")
+ (sequence "WAITING(w@/!)" "HOLD(h@/!)" "|" "CANCELLED(c@/!)" "PHONE" "MEETING"))))
+
+(setq org-todo-keyword-faces
+ (quote (("TODO" :foreground "red" :weight bold)
+ ("NEXT" :foreground "blue" :weight bold)
+ ("DONE" :foreground "forest green" :weight bold)
+ ("WAITING" :foreground "orange" :weight bold)
+ ("HOLD" :foreground "magenta" :weight bold)
+ ("CANCELLED" :foreground "forest green" :weight bold)
+ ("MEETING" :foreground "forest green" :weight bold)
+ ("PHONE" :foreground "forest green" :weight bold))))
+
+(setq org-todo-state-tags-triggers
+ (quote (("CANCELLED" ("CANCELLED" . t))
+ ("WAITING" ("WAITING" . t))
+ ("HOLD" ("WAITING") ("HOLD" . t))
+ (done ("WAITING") ("HOLD"))
+ ("TODO" ("WAITING") ("CANCELLED") ("HOLD"))
+ ("NEXT" ("WAITING") ("CANCELLED") ("HOLD"))
+ ("DONE" ("WAITING") ("CANCELLED") ("HOLD")))))
+
+
+
+; (add-hook 'org-clock-out-hook 'bh/remove-empty-drawer-on-clock-out 'append)
+; add ids on creation of nodes
+(add-hook 'org-capture-prepare-finalize-hook 'my/org-add-id)
+
+
+; resolve clocks after 10 minutes of idle; use xprintidle
+; (setq org-clock-idle-time 10)
+; (setq org-clock-x11idle-program-name "xprintidle")
+
+; this is from http://doc.norang.ca/org-mode.html#Capture
+; use C-M-r for org mode capture
+(global-set-key (kbd "C-M-r") 'org-capture)
+
+; Targets include this file and any file contributing to the agenda - up to 9 levels deep
+(setq org-refile-targets (quote ((nil :maxlevel . 9)
+ (org-agenda-files :maxlevel . 9))))
+
+; Use full outline paths for refile targets - we file directly with IDO
+(setq org-refile-use-outline-path t)
+
+; Targets complete directly with IDO
+(setq org-outline-path-complete-in-steps nil)
+
+; Allow refile to create parent tasks with confirmation
+(setq org-refile-allow-creating-parent-nodes (quote confirm))
+
+; ; Use IDO for both buffer and file completion and ido-everywhere to t
+; (setq org-completion-use-ido t)
+; (setq ido-everywhere t)
+; (setq ido-max-directory-size 100000)
+; (ido-mode (quote both))
+; ; Use the current window when visiting files and buffers with ido
+; (setq ido-default-file-method 'selected-window)
+; (setq ido-default-buffer-method 'selected-window)
+; ; Use the current window for indirect buffer display
+; (setq org-indirect-buffer-display 'current-window)
+
+
+;;;; Refile settings
+; Exclude DONE state tasks from refile targets
+(defun bh/verify-refile-target ()
+ "Exclude todo keywords with a done state from refile targets"
+ (not (member (nth 2 (org-heading-components)) org-done-keywords)))
+
+(setq org-refile-target-verify-function 'bh/verify-refile-target)
+
+;; ensure that emacsclient will show just the note to be edited when invoked
+;; from Mutt, and that it will shut down emacsclient once finished;
+;; fallback to legacy behavior when not invoked via org-protocol.
+(require 'org-protocol)
+; (add-hook 'org-capture-mode-hook 'delete-other-windows)
+(setq my-org-protocol-flag nil)
+(defadvice org-capture-finalize (after delete-frame-at-end activate)
+ "Delete frame at remember finalization"
+ (progn (if my-org-protocol-flag (delete-frame))
+ (setq my-org-protocol-flag nil)))
+(defadvice org-capture-refile (around delete-frame-after-refile activate)
+ "Delete frame at remember refile"
+ (if my-org-protocol-flag
+ (progn
+ (setq my-org-protocol-flag nil)
+ ad-do-it
+ (delete-frame))
+ ad-do-it)
+ )
+(defadvice org-capture-kill (after delete-frame-at-end activate)
+ "Delete frame at remember abort"
+ (progn (if my-org-protocol-flag (delete-frame))
+ (setq my-org-protocol-flag nil)))
+(defadvice org-protocol-capture (before set-org-protocol-flag activate)
+ (setq my-org-protocol-flag t))
+
+(defadvice org-insert-todo-heading (after dla/create-id activate)
+ (unless (org-in-item-p)
+ (org-id-get-create)
)
- (add-hook 'org-mode-hook 'my-org-mode-setup)
+ )
- (defun org-mode-reftex-search ()
- (interactive)
- (org-open-link-from-string (format "[[notes:%s]]" (first (reftex-citation t)))))
-
- (defun open-research-paper (bibtexkey)
- "Open a paper by bibtex key"
- (interactive "bibtex key: ")
- (shell-command
- (format "%s %s"
- (substitute-in-file-name "$HOME/bin/bibtex_to_paper") bibtexkey)))
- (org-add-link-type "papers" 'open-research-paper)
- (defun open-research-paper-pdf (bibtexkey)
- "Open a paper pdf by bibtex key"
- (interactive "bibtex key: ")
- (shell-command
- (format "%s -p evince_annot %s"
- (substitute-in-file-name "$HOME/bin/bibtex_to_paper") bibtexkey)))
- (org-add-link-type "papers-pdf" 'open-research-paper-pdf)
-
- (add-to-list 'org-link-abbrev-alist
- '("notes" .
- "~/projects/research/paper_notes.org::#%s"))
-
- ; I pretty much always want hiearchical checkboxes
- (setq org-hierachical-checkbox-statistics nil)
-
- ;; Add \begin{equation}\end{equation} templates to the org mode easy templates
- (add-to-list 'org-structure-template-alist
- '("E" "\\begin{equation}\n?\n\\end{equation}"))
-
- ;; stolen from
- ;; http://www-public.it-sudparis.eu/~berger_o/weblog/2012/03/23/how-to-manage-and-export-bibliographic-notesrefs-in-org-mode/
- (defun my-rtcite-export-handler (path desc format)
- (message "my-rtcite-export-handler is called : path = %s, desc = %s, format = %s" path desc format)
- (let* ((search (when (string-match "::#?\\(.+\\)\\'" path)
- (match-string 1 path)))
- (path (substring path 0 (match-beginning 0))))
- (cond ((eq format 'latex)
- (if (or (not desc)
- (equal 0 (search "rtcite:" desc)))
- (format "\\cite{%s}" search)
- (format "\\cite[%s]{%s}" desc search))))))
-
- (org-add-link-type "rtcite"
- 'org-bibtex-open
- 'my-rtcite-export-handler)
+;; org modules
+(add-to-list 'org-modules 'org-habit)
+
+; this comes from http://upsilon.cc/~zack/blog/posts/2010/02/integrating_Mutt_with_Org-mode/
+(defun open-mail-in-mutt (message)
+ "Open a mail message in Mutt, using an external terminal.
+
+Message can be specified either by a path pointing inside a
+Maildir, or by Message-ID."
+ (interactive "MPath or Message-ID: ")
+ (shell-command
+ (format "faf xterm -e \"%s %s\""
+ (substitute-in-file-name "$HOME/bin/mutt_open") message)))
+
+;; add support for "mutt:ID" links
+(org-add-link-type "mutt" 'open-mail-in-mutt)
+
+(defun my-org-mode-setup ()
+ ; (load-library "reftex")
+ (and (buffer-file-name)
+ (file-exists-p (buffer-file-name))
+ (progn
+ ; (reftex-parse-all)
+ (reftex-set-cite-format
+ '((?b . "[[bib:%l][%l-bib]]")
+ (?n . "[[notes:%l][%l-notes]]")
+ (?c . "\\cite{%l}")
+ (?h . "*** %t\n:PROPERTIES:\n:Custom_ID: %l\n:END:\n[[papers:%l][%l xoj]] [[papers-pdf:%l][pdf]]")))
+ ))
+ (define-key org-mode-map (kbd "C-c )") 'reftex-citation)
+ (define-key org-mode-map (kbd "C-c [") 'reftex-citation)
+ (define-key org-mode-map (kbd "C-c (") 'org-mode-reftex-search)
+ (define-key org-mode-map (kbd "C-c 0") 'reftex-view-crossref)
+ )
+(add-hook 'org-mode-hook 'my-org-mode-setup)
+
+(defun org-mode-reftex-search ()
+ (interactive)
+ (org-open-link-from-string (format "[[notes:%s]]" (first (reftex-citation t)))))
+
+(defun open-research-paper (bibtexkey)
+ "Open a paper by bibtex key"
+ (interactive "bibtex key: ")
+ (shell-command
+ (format "%s %s"
+ (substitute-in-file-name "$HOME/bin/bibtex_to_paper") bibtexkey)))
+(org-add-link-type "papers" 'open-research-paper)
+(defun open-research-paper-pdf (bibtexkey)
+ "Open a paper pdf by bibtex key"
+ (interactive "bibtex key: ")
+ (shell-command
+ (format "%s -p evince_annot %s"
+ (substitute-in-file-name "$HOME/bin/bibtex_to_paper") bibtexkey)))
+(org-add-link-type "papers-pdf" 'open-research-paper-pdf)
+
+(add-to-list 'org-link-abbrev-alist
+ '("notes" .
+ "~/projects/research/paper_notes.org::#%s"))
+
+; I pretty much always want hiearchical checkboxes
+(setq org-hierachical-checkbox-statistics nil)
+
+;; Add \begin{equation}\end{equation} templates to the org mode easy templates
+(add-to-list 'org-structure-template-alist
+ '("E" "\\begin{equation}\n?\n\\end{equation}"))
+
+ ;; stolen from
+;; http://www-public.it-sudparis.eu/~berger_o/weblog/2012/03/23/how-to-manage-and-export-bibliographic-notesrefs-in-org-mode/
+(defun my-rtcite-export-handler (path desc format)
+ (message "my-rtcite-export-handler is called : path = %s, desc = %s, format = %s" path desc format)
+ (let* ((search (when (string-match "::#?\\(.+\\)\\'" path)
+ (match-string 1 path)))
+ (path (substring path 0 (match-beginning 0))))
+ (cond ((eq format 'latex)
+ (if (or (not desc)
+ (equal 0 (search "rtcite:" desc)))
+ (format "\\cite{%s}" search)
+ (format "\\cite[%s]{%s}" desc search))))))
+
+(org-add-link-type "rtcite"
+ 'org-bibtex-open
+ 'my-rtcite-export-handler)
#+END_SRC
#+END_SRC
** LaTeX configuration
- :PROPERTIES:
- :ID: 7135ba17-6a50-4eed-84ca-b90afa5b12f8
- :END:
-#+BEGIN_SRC emacs-lisp
- (require 'ox-latex)
- (add-to-list 'org-latex-classes
- '("memarticle"
- "\\documentclass[11pt,oneside,article]{memoir}\n"
- ("\\section{%s}" . "\\section*{%s}")
- ("\\subsection{%s}" . "\\subsection*{%s}")
- ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
- ("\\paragraph{%s}" . "\\paragraph*{%s}")
- ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
-
- (setq org-beamer-outline-frame-options "")
- (add-to-list 'org-latex-classes
- '("beamer"
- "\\documentclass[ignorenonframetext]{beamer}
- [NO-DEFAULT-PACKAGES]
- [PACKAGES]
- [EXTRA]"
- ("\\section{%s}" . "\\section*{%s}")
- ("\\subsection{%s}" . "\\subsection*{%s}")
- ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
- ("\\paragraph{%s}" . "\\paragraph*{%s}")
- ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
-
- (add-to-list 'org-latex-classes
- '("membook"
- "\\documentclass[11pt,oneside]{memoir}\n"
- ("\\chapter{%s}" . "\\chapter*{%s}")
- ("\\section{%s}" . "\\section*{%s}")
- ("\\subsection{%s}" . "\\subsection*{%s}")
- ("\\subsubsection{%s}" . "\\subsubsection*{%s}")))
-
- (add-to-list 'org-latex-classes
- '("letter"
- "\\documentclass[11pt]{letter}
- [NO-DEFAULT-PACKAGES]
- [PACKAGES]
- [EXTRA]"
- ("\\section{%s}" . "\\section*{%s}")
- ("\\subsection{%s}" . "\\subsection*{%s}")
- ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
- ("\\paragraph{%s}" . "\\paragraph*{%s}")
- ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
-
- (add-to-list 'org-latex-classes
- '("dlacv"
- "\\documentclass{dlacv}
- [NO-DEFAULT-PACKAGES]
- [NO-PACKAGES]
- [NO-EXTRA]"
- ("\\section{%s}" . "\\section*{%s}")
- ("\\subsection{%s}" . "\\subsection*{%s}")
- ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
- ("\\paragraph{%s}" . "\\paragraph*{%s}")
- ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
-
-
- (add-to-list 'org-latex-classes
- '("dlaresume"
- "\\documentclass{dlaresume}
- [NO-DEFAULT-PACKAGES]
- [NO-PACKAGES]
- [NO-EXTRA]"
- ("\\section{%s}" . "\\section*{%s}")
- ("\\subsection{%s}" . "\\subsection*{%s}")
- ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
- ("\\paragraph{%s}" . "\\paragraph*{%s}")
- ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
-
-
- ;; Originally taken from Bruno Tavernier: http://thread.gmane.org/gmane.emacs.orgmode/31150/focus=31432
- ;; but adapted to use latexmk 4.22 or higher.
- (setq org-latex-pdf-process '("latexmk -f -pdflatex=xelatex -bibtex -use-make -pdf %f"))
-
- ;; Default packages included in /every/ tex file, latex, pdflatex or xelatex
- (setq org-latex-default-packages-alist
- '(("" "amsmath" t)
- ("" "unicode-math" t)
- ))
- (setq org-latex-packages-alist
- '(("" "graphicx" t)
- ("" "fontspec" t)
- ("" "xunicode" t)
- ("" "hyperref" t)
- ("" "url" t)
- ("" "rotating" t)
- ("" "longtable" nil)
- ("" "float" )))
-
- ;; make equations larger
- (setq org-format-latex-options (plist-put org-format-latex-options :scale 2.0))
-
- (defun org-create-formula--latex-header ()
- "Return LaTeX header appropriate for previewing a LaTeX snippet."
- (let ((info (org-combine-plists (org-export--get-global-options
- (org-export-get-backend 'latex))
- (org-export--get-inbuffer-options
- (org-export-get-backend 'latex)))))
- (org-latex-guess-babel-language
- (org-latex-guess-inputenc
- (org-splice-latex-header
- org-format-latex-header
- org-latex-default-packages-alist
- nil t
- (plist-get info :latex-header)))
- info)))
-
-
- ; support ignoring headers in org mode export to latex
- ; from http://article.gmane.org/gmane.emacs.orgmode/67692
- (defadvice org-latex-headline (around my-latex-skip-headlines
- (headline contents info) activate)
- (if (member "ignoreheading" (org-element-property :tags headline))
- (setq ad-return-value contents)
- ad-do-it))
-
- ;; keep latex logfiles
-
- (setq org-latex-remove-logfiles nil)
-
- ;; Resume clocking task when emacs is restarted
- (org-clock-persistence-insinuate)
- ;;
- ;; Show lot of clocking history so it's easy to pick items off the C-F11 list
- (setq org-clock-history-length 23)
- ;; Resume clocking task on clock-in if the clock is open
- (setq org-clock-in-resume t)
- ;; Change tasks to NEXT when clocking in; this avoids clocking in when
- ;; there are things like PHONE calls
- (setq org-clock-in-switch-to-state 'bh/clock-in-to-next)
- ;; Separate drawers for clocking and logs
- (setq org-drawers (quote ("PROPERTIES" "LOGBOOK")))
- ;; Save clock data and state changes and notes in the LOGBOOK drawer
- (setq org-clock-into-drawer t)
- (setq org-log-into-drawer t)
- ;; Sometimes I change tasks I'm clocking quickly - this removes clocked tasks with 0:00 duration
- (setq org-clock-out-remove-zero-time-clocks t)
- ;; Clock out when moving task to a done state
- (setq org-clock-out-when-done t)
- ;; Save the running clock and all clock history when exiting Emacs, load it on startup
- (setq org-clock-persist t)
- ;; Do not prompt to resume an active clock
- (setq org-clock-persist-query-resume nil)
- ;; Enable auto clock resolution for finding open clocks
- (setq org-clock-auto-clock-resolution (quote when-no-clock-is-running))
- ;; Include current clocking task in clock reports
- (setq org-clock-report-include-clocking-task t)
-
- ;; the cache seems to be broken
- (setq org-element-use-cache nil)
-
- (defvar bh/keep-clock-running nil)
-
- (defun bh/is-task-p ()
- "Any task with a todo keyword and no subtask"
- (save-restriction
- (widen)
- (let ((has-subtask)
- (subtree-end (save-excursion (org-end-of-subtree t)))
- (is-a-task (member (nth 2 (org-heading-components)) org-todo-keywords-1)))
- (save-excursion
- (forward-line 1)
- (while (and (not has-subtask)
- (< (point) subtree-end)
- (re-search-forward "^\*+ " subtree-end t))
- (when (member (org-get-todo-state) org-todo-keywords-1)
- (setq has-subtask t))))
- (and is-a-task (not has-subtask)))))
- (defun bh/is-project-p ()
- "Any task with a todo keyword subtask"
- (save-restriction
- (widen)
- (let ((has-subtask)
- (subtree-end (save-excursion (org-end-of-subtree t)))
- (is-a-task (member (nth 2 (org-heading-components)) org-todo-keywords-1)))
- (save-excursion
- (forward-line 1)
- (while (and (not has-subtask)
- (< (point) subtree-end)
- (re-search-forward "^\*+ " subtree-end t))
- (when (member (org-get-todo-state) org-todo-keywords-1)
- (setq has-subtask t))))
- (and is-a-task has-subtask))))
-
- (defun bh/is-subproject-p ()
- "Any task which is a subtask of another project"
- (let ((is-subproject)
+#+BEGIN_SRC emacs-lisp
+(use-package ox-extra
+ :config
+ (ox-extras-activate '(ignore-headlines)))
+(require 'ox-latex)
+(add-to-list 'org-latex-classes
+ '("memarticle"
+ "\\documentclass[11pt,oneside,article]{memoir}\n"
+ ("\\section{%s}" . "\\section*{%s}")
+ ("\\subsection{%s}" . "\\subsection*{%s}")
+ ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
+ ("\\paragraph{%s}" . "\\paragraph*{%s}")
+ ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
+
+(setq org-beamer-outline-frame-options "")
+(add-to-list 'org-latex-classes
+ '("beamer"
+ "\\documentclass[ignorenonframetext]{beamer}
+[NO-DEFAULT-PACKAGES]
+[PACKAGES]
+[EXTRA]"
+ ("\\section{%s}" . "\\section*{%s}")
+ ("\\subsection{%s}" . "\\subsection*{%s}")
+ ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
+ ("\\paragraph{%s}" . "\\paragraph*{%s}")
+ ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
+
+(add-to-list 'org-latex-classes
+ '("membook"
+ "\\documentclass[11pt,oneside]{memoir}\n"
+ ("\\chapter{%s}" . "\\chapter*{%s}")
+ ("\\section{%s}" . "\\section*{%s}")
+ ("\\subsection{%s}" . "\\subsection*{%s}")
+ ("\\subsubsection{%s}" . "\\subsubsection*{%s}")))
+
+(add-to-list 'org-latex-classes
+ '("letter"
+ "\\documentclass[11pt]{letter}
+[NO-DEFAULT-PACKAGES]
+[PACKAGES]
+[EXTRA]"
+ ("\\section{%s}" . "\\section*{%s}")
+ ("\\subsection{%s}" . "\\subsection*{%s}")
+ ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
+ ("\\paragraph{%s}" . "\\paragraph*{%s}")
+ ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
+
+(add-to-list 'org-latex-classes
+ '("dlacv"
+ "\\documentclass{dlacv}
+[NO-DEFAULT-PACKAGES]
+[NO-PACKAGES]
+[NO-EXTRA]"
+ ("\\section{%s}" . "\\section*{%s}")
+ ("\\subsection{%s}" . "\\subsection*{%s}")
+ ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
+ ("\\paragraph{%s}" . "\\paragraph*{%s}")
+ ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
+
+
+(add-to-list 'org-latex-classes
+ '("dlaresume"
+ "\\documentclass{dlaresume}
+[NO-DEFAULT-PACKAGES]
+[NO-PACKAGES]
+[NO-EXTRA]"
+ ("\\section{%s}" . "\\section*{%s}")
+ ("\\subsection{%s}" . "\\subsection*{%s}")
+ ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
+ ("\\paragraph{%s}" . "\\paragraph*{%s}")
+ ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
+
+
+;; Originally taken from Bruno Tavernier: http://thread.gmane.org/gmane.emacs.orgmode/31150/focus=31432
+;; but adapted to use latexmk 4.22 or higher.
+(setq org-latex-pdf-process '("latexmk -f -pdflatex=xelatex -bibtex -use-make -pdf %f"))
+
+;; Default packages included in /every/ tex file, latex, pdflatex or xelatex
+(setq org-latex-default-packages-alist
+ '(("" "amsmath" t)
+ ("" "unicode-math" t)
+ ))
+(setq org-latex-packages-alist
+ '(("" "graphicx" t)
+ ("" "fontspec" t)
+ ("" "xunicode" t)
+ ("" "hyperref" t)
+ ("" "url" t)
+ ("" "rotating" t)
+ ("" "longtable" nil)
+ ("" "float" )))
+
+;; make equations larger
+(setq org-format-latex-options (plist-put org-format-latex-options :scale 2.0))
+
+(defun org-create-formula--latex-header ()
+ "Return LaTeX header appropriate for previewing a LaTeX snippet."
+ (let ((info (org-combine-plists (org-export--get-global-options
+ (org-export-get-backend 'latex))
+ (org-export--get-inbuffer-options
+ (org-export-get-backend 'latex)))))
+ (org-latex-guess-babel-language
+ (org-latex-guess-inputenc
+ (org-splice-latex-header
+ org-format-latex-header
+ org-latex-default-packages-alist
+ nil t
+ (plist-get info :latex-header)))
+ info)))
+
+
+; support ignoring headers in org mode export to latex
+; from http://article.gmane.org/gmane.emacs.orgmode/67692
+(defadvice org-latex-headline (around my-latex-skip-headlines
+ (headline contents info) activate)
+ (if (member "ignoreheading" (org-element-property :tags headline))
+ (setq ad-return-value contents)
+ ad-do-it))
+
+;; keep latex logfiles
+
+(setq org-latex-remove-logfiles nil)
+
+;; Resume clocking task when emacs is restarted
+(org-clock-persistence-insinuate)
+;;
+;; Show lot of clocking history so it's easy to pick items off the C-F11 list
+(setq org-clock-history-length 23)
+;; Resume clocking task on clock-in if the clock is open
+(setq org-clock-in-resume t)
+;; Change tasks to NEXT when clocking in; this avoids clocking in when
+;; there are things like PHONE calls
+(setq org-clock-in-switch-to-state 'bh/clock-in-to-next)
+;; Separate drawers for clocking and logs
+(setq org-drawers (quote ("PROPERTIES" "LOGBOOK")))
+;; Save clock data and state changes and notes in the LOGBOOK drawer
+(setq org-clock-into-drawer t)
+(setq org-log-into-drawer t)
+;; Sometimes I change tasks I'm clocking quickly - this removes clocked tasks with 0:00 duration
+(setq org-clock-out-remove-zero-time-clocks t)
+;; Clock out when moving task to a done state
+(setq org-clock-out-when-done t)
+;; Save the running clock and all clock history when exiting Emacs, load it on startup
+(setq org-clock-persist t)
+;; Do not prompt to resume an active clock
+(setq org-clock-persist-query-resume nil)
+;; Enable auto clock resolution for finding open clocks
+(setq org-clock-auto-clock-resolution (quote when-no-clock-is-running))
+;; Include current clocking task in clock reports
+(setq org-clock-report-include-clocking-task t)
+
+;; the cache seems to be broken
+(setq org-element-use-cache nil)
+
+(defvar bh/keep-clock-running nil)
+
+(defun bh/is-task-p ()
+ "Any task with a todo keyword and no subtask"
+ (save-restriction
+ (widen)
+ (let ((has-subtask)
+ (subtree-end (save-excursion (org-end-of-subtree t)))
(is-a-task (member (nth 2 (org-heading-components)) org-todo-keywords-1)))
(save-excursion
- (while (and (not is-subproject) (org-up-heading-safe))
- (when (member (nth 2 (org-heading-components)) org-todo-keywords-1)
- (setq is-subproject t))))
- (and is-a-task is-subproject)))
-
-
- (defun bh/clock-in-to-next (kw)
- "Switch a task from TODO to NEXT when clocking in.
- Skips capture tasks, projects, and subprojects.
- Switch projects and subprojects from NEXT back to TODO"
- (when (not (and (boundp 'org-capture-mode) org-capture-mode))
- (cond
- ((and (member (org-get-todo-state) (list "TODO"))
- (bh/is-task-p))
- "NEXT")
- ((and (member (org-get-todo-state) (list "NEXT"))
- (bh/is-project-p))
- "TODO"))))
-
- (defun bh/punch-in (arg)
- "Start continuous clocking and set the default task to the
- selected task. If no task is selected set the Organization task
- as the default task."
- (interactive "p")
- (setq bh/keep-clock-running t)
- (if (equal major-mode 'org-agenda-mode)
- ;;
- ;; We're in the agenda
- ;;
- (let* ((marker (org-get-at-bol 'org-hd-marker))
- (tags (org-with-point-at marker (org-get-tags-at))))
- (if (and (eq arg 4) tags)
- (org-agenda-clock-in '(16))
- (bh/clock-in-organization-task-as-default)))
- ;;
- ;; We are not in the agenda
- ;;
- (save-restriction
+ (forward-line 1)
+ (while (and (not has-subtask)
+ (< (point) subtree-end)
+ (re-search-forward "^\*+ " subtree-end t))
+ (when (member (org-get-todo-state) org-todo-keywords-1)
+ (setq has-subtask t))))
+ (and is-a-task (not has-subtask)))))
+(defun bh/is-project-p ()
+ "Any task with a todo keyword subtask"
+ (save-restriction
(widen)
- ; Find the tags on the current task
- (if (and (equal major-mode 'org-mode) (not (org-before-first-heading-p)) (eq arg 4))
- (org-clock-in '(16))
- (bh/clock-in-organization-task-as-default)))))
-
- (defun bh/punch-out ()
- (interactive)
- (setq bh/keep-clock-running nil)
- (when (org-clock-is-active)
- (org-clock-out))
- (org-agenda-remove-restriction-lock))
-
- (defun bh/clock-in-default-task ()
+ (let ((has-subtask)
+ (subtree-end (save-excursion (org-end-of-subtree t)))
+ (is-a-task (member (nth 2 (org-heading-components)) org-todo-keywords-1)))
+ (save-excursion
+ (forward-line 1)
+ (while (and (not has-subtask)
+ (< (point) subtree-end)
+ (re-search-forward "^\*+ " subtree-end t))
+ (when (member (org-get-todo-state) org-todo-keywords-1)
+ (setq has-subtask t))))
+ (and is-a-task has-subtask))))
+
+(defun bh/is-subproject-p ()
+ "Any task which is a subtask of another project"
+ (let ((is-subproject)
+ (is-a-task (member (nth 2 (org-heading-components)) org-todo-keywords-1)))
(save-excursion
- (org-with-point-at org-clock-default-task
- (org-clock-in))))
+ (while (and (not is-subproject) (org-up-heading-safe))
+ (when (member (nth 2 (org-heading-components)) org-todo-keywords-1)
+ (setq is-subproject t))))
+ (and is-a-task is-subproject)))
- (defun bh/clock-in-parent-task ()
- "Move point to the parent (project) task if any and clock in"
- (let ((parent-task))
- (save-excursion
+
+(defun bh/clock-in-to-next (kw)
+ "Switch a task from TODO to NEXT when clocking in.
+Skips capture tasks, projects, and subprojects.
+Switch projects and subprojects from NEXT back to TODO"
+ (when (not (and (boundp 'org-capture-mode) org-capture-mode))
+ (cond
+ ((and (member (org-get-todo-state) (list "TODO"))
+ (bh/is-task-p))
+ "NEXT")
+ ((and (member (org-get-todo-state) (list "NEXT"))
+ (bh/is-project-p))
+ "TODO"))))
+
+(defun bh/punch-in (arg)
+ "Start continuous clocking and set the default task to the
+selected task. If no task is selected set the Organization task
+as the default task."
+ (interactive "p")
+ (setq bh/keep-clock-running t)
+ (if (equal major-mode 'org-agenda-mode)
+ ;;
+ ;; We're in the agenda
+ ;;
+ (let* ((marker (org-get-at-bol 'org-hd-marker))
+ (tags (org-with-point-at marker (org-get-tags))))
+ (if (and (eq arg 4) tags)
+ (org-agenda-clock-in '(16))
+ (bh/clock-in-organization-task-as-default)))
+ ;;
+ ;; We are not in the agenda
+ ;;
(save-restriction
- (widen)
- (while (and (not parent-task) (org-up-heading-safe))
- (when (member (nth 2 (org-heading-components)) org-todo-keywords-1)
- (setq parent-task (point))))
- (if parent-task
- (org-with-point-at parent-task
- (org-clock-in))
- (when bh/keep-clock-running
- (bh/clock-in-default-task)))))))
+ (widen)
+ ; Find the tags on the current task
+ (if (and (equal major-mode 'org-mode) (not (org-before-first-heading-p)) (eq arg 4))
+ (org-clock-in '(16))
+ (bh/clock-in-organization-task-as-default)))))
+
+(defun bh/punch-out ()
+ (interactive)
+ (setq bh/keep-clock-running nil)
+ (when (org-clock-is-active)
+ (org-clock-out))
+ (org-agenda-remove-restriction-lock))
+
+(defun bh/clock-in-default-task ()
+ (save-excursion
+ (org-with-point-at org-clock-default-task
+ (org-clock-in))))
- (defvar bh/organization-task-id "e22cb8bf-07c7-408b-8f60-ff3aadac95e4")
+(defun bh/clock-in-parent-task ()
+ "Move point to the parent (project) task if any and clock in"
+ (let ((parent-task))
+ (save-excursion
+ (save-restriction
+ (widen)
+ (while (and (not parent-task) (org-up-heading-safe))
+ (when (member (nth 2 (org-heading-components)) org-todo-keywords-1)
+ (setq parent-task (point))))
+ (if parent-task
+ (org-with-point-at parent-task
+ (org-clock-in))
+ (when bh/keep-clock-running
+ (bh/clock-in-default-task)))))))
+
+(defvar bh/organization-task-id "e22cb8bf-07c7-408b-8f60-ff3aadac95e4")
+
+(defun bh/clock-in-organization-task-as-default ()
+ (interactive)
+ (org-with-point-at (org-id-find bh/organization-task-id 'marker)
+ (org-clock-in '(16))))
+
+(defun bh/clock-out-maybe ()
+ (when (and bh/keep-clock-running
+ (not org-clock-clocking-in)
+ (marker-buffer org-clock-default-task)
+ (not org-clock-resolving-clocks-due-to-idleness))
+ (bh/clock-in-parent-task)))
+
+; (add-hook 'org-clock-out-hook 'bh/clock-out-maybe 'append)
+
+(require 'org-id)
+(defun bh/clock-in-task-by-id (id)
+ "Clock in a task by id"
+ (org-with-point-at (org-id-find id 'marker)
+ (org-clock-in nil)))
+
+(defun bh/clock-in-last-task (arg)
+ "Clock in the interrupted task if there is one
+Skip the default task and get the next one.
+A prefix arg forces clock in of the default task."
+ (interactive "p")
+ (let ((clock-in-to-task
+ (cond
+ ((eq arg 4) org-clock-default-task)
+ ((and (org-clock-is-active)
+ (equal org-clock-default-task (cadr org-clock-history)))
+ (caddr org-clock-history))
+ ((org-clock-is-active) (cadr org-clock-history))
+ ((equal org-clock-default-task (car org-clock-history)) (cadr org-clock-history))
+ (t (car org-clock-history)))))
+ (widen)
+ (org-with-point-at clock-in-to-task
+ (org-clock-in nil))))
+
+
+(defun org-export-to-ods ()
+ (interactive)
+ (let ((csv-file "data.csv"))
+ (org-table-export csv-file "orgtbl-to-csv")
+ (org-odt-convert csv-file "ods" 'open)))
+
+; allow for zero-width-space to be a break in regexp too
+; (setcar org-emphasis-regexp-components " [:space:] \t('\"{")
+; (setcar (nthcdr 1 org-emphasis-regexp-components) " [:space:]- \t.,:!?;'\")}\\")
+; (org-set-emph-re 'org-emphasis-regexp-components org-emphasis-regexp-components)
+
+;; support inserting screen shots
+(defun my/org-insert-screenshot ()
+ "Take a screenshot into a time stamped unique-named file in the
+same directory as the org-buffer and insert a link to this file."
+ (interactive)
+ (defvar my/org-insert-screenshot/filename)
+ (setq my/org-insert-screenshot/filename
+ (read-file-name
+ "Screenshot to insert: "
+ nil
+ (concat (buffer-file-name) "_" (format-time-string "%Y%m%d_%H%M%S") ".png")
+ )
+ )
+ (call-process "import" nil nil nil my/org-insert-screenshot/filename)
+ (insert (concat "[[" my/org-insert-screenshot/filename "]]"))
+ (org-display-inline-images))
- (defun bh/clock-in-organization-task-as-default ()
- (interactive)
- (org-with-point-at (org-id-find bh/organization-task-id 'marker)
- (org-clock-in '(16))))
-
- (defun bh/clock-out-maybe ()
- (when (and bh/keep-clock-running
- (not org-clock-clocking-in)
- (marker-buffer org-clock-default-task)
- (not org-clock-resolving-clocks-due-to-idleness))
- (bh/clock-in-parent-task)))
-
- ; (add-hook 'org-clock-out-hook 'bh/clock-out-maybe 'append)
-
- (require 'org-id)
- (defun bh/clock-in-task-by-id (id)
- "Clock in a task by id"
- (org-with-point-at (org-id-find id 'marker)
- (org-clock-in nil)))
-
- (defun bh/clock-in-last-task (arg)
- "Clock in the interrupted task if there is one
- Skip the default task and get the next one.
- A prefix arg forces clock in of the default task."
- (interactive "p")
- (let ((clock-in-to-task
- (cond
- ((eq arg 4) org-clock-default-task)
- ((and (org-clock-is-active)
- (equal org-clock-default-task (cadr org-clock-history)))
- (caddr org-clock-history))
- ((org-clock-is-active) (cadr org-clock-history))
- ((equal org-clock-default-task (car org-clock-history)) (cadr org-clock-history))
- (t (car org-clock-history)))))
- (widen)
- (org-with-point-at clock-in-to-task
- (org-clock-in nil))))
-
-
- (defun org-export-to-ods ()
- (interactive)
- (let ((csv-file "data.csv"))
- (org-table-export csv-file "orgtbl-to-csv")
- (org-odt-convert csv-file "ods" 'open)))
-
- ; allow for zero-width-space to be a break in regexp too
- ; (setcar org-emphasis-regexp-components " [:space:] \t('\"{")
- ; (setcar (nthcdr 1 org-emphasis-regexp-components) " [:space:]- \t.,:!?;'\")}\\")
- ; (org-set-emph-re 'org-emphasis-regexp-components org-emphasis-regexp-components)
-
- ;; support inserting screen shots
- (defun my/org-insert-screenshot ()
- "Take a screenshot into a time stamped unique-named file in the
- same directory as the org-buffer and insert a link to this file."
- (interactive)
- (defvar my/org-insert-screenshot/filename)
- (setq my/org-insert-screenshot/filename
- (read-file-name
- "Screenshot to insert: "
- nil
- (concat (buffer-file-name) "_" (format-time-string "%Y%m%d_%H%M%S") ".png")
- )
- )
- (call-process "import" nil nil nil my/org-insert-screenshot/filename)
- (insert (concat "[[" my/org-insert-screenshot/filename "]]"))
- (org-display-inline-images))
-
- (defun my/fix-inline-images ()
- (when org-inline-image-overlays
- (org-redisplay-inline-images)))
-
- (add-hook 'org-babel-after-execute-hook 'my/fix-inline-images)
-
- ;; use xelatex to preview with imagemagick
- (add-to-list 'org-preview-latex-process-alist
- '(xelateximagemagick
- :programs ("xelatex" "convert")
- :description "pdf > png"
- :message "you need to install xelatex and imagemagick"
- :use-xcolor t
- :image-input-type "pdf"
- :image-output-type "png"
- :image-size-adjust (1.0 . 1.0)
- :latex-compiler ("xelatex -interaction nonstopmode -output-directory %o %f")
- :image-converter ("convert -density %D -trim -antialias %f -quality 100 %O"))
- )
- ;; use xelatex by default
- (setq org-preview-latex-default-process 'xelateximagemagick)
+(defun my/fix-inline-images ()
+ (when org-inline-image-overlays
+ (org-redisplay-inline-images)))
- ; from http://orgmode.org/Changes.html
- (defun my/org-repair-property-drawers ()
- "Fix properties drawers in current buffer.
- Ignore non Org buffers."
- (interactive)
- (when (eq major-mode 'org-mode)
- (org-with-wide-buffer
- (goto-char (point-min))
- (let ((case-fold-search t)
- (inline-re (and (featurep 'org-inlinetask)
- (concat (org-inlinetask-outline-regexp)
- "END[ \t]*$"))))
- (org-map-entries
- (lambda ()
- (unless (and inline-re (org-looking-at-p inline-re))
- (save-excursion
- (let ((end (save-excursion (outline-next-heading) (point))))
- (forward-line)
- (when (org-looking-at-p org-planning-line-re) (forward-line))
- (when (and (< (point) end)
- (not (org-looking-at-p org-property-drawer-re))
- (save-excursion
- (and (re-search-forward org-property-drawer-re end t)
- (eq (org-element-type
- (save-match-data (org-element-at-point)))
- 'drawer))))
- (insert (delete-and-extract-region
- (match-beginning 0)
- (min (1+ (match-end 0)) end)))
- (unless (bolp) (insert "\n"))))))))))))
+(add-hook 'org-babel-after-execute-hook 'my/fix-inline-images)
+
+;; use xelatex to preview with imagemagick
+(add-to-list 'org-preview-latex-process-alist
+ '(xelateximagemagick
+ :programs ("xelatex" "convert")
+ :description "pdf > png"
+ :message "you need to install xelatex and imagemagick"
+ :use-xcolor t
+ :image-input-type "pdf"
+ :image-output-type "png"
+ :image-size-adjust (1.0 . 1.0)
+ :latex-compiler ("xelatex -interaction nonstopmode -output-directory %o %f")
+ :image-converter ("convert -density %D -trim -antialias %f -quality 100 %O"))
+ )
+;; use xelatex by default
+(setq org-preview-latex-default-process 'xelateximagemagick)
+
+; from http://orgmode.org/Changes.html
+(defun my/org-repair-property-drawers ()
+ "Fix properties drawers in current buffer.
+ Ignore non Org buffers."
+ (interactive)
+ (when (eq major-mode 'org-mode)
+ (org-with-wide-buffer
+ (goto-char (point-min))
+ (let ((case-fold-search t)
+ (inline-re (and (featurep 'org-inlinetask)
+ (concat (org-inlinetask-outline-regexp)
+ "END[ \t]*$"))))
+ (org-map-entries
+ (lambda ()
+ (unless (and inline-re (org-looking-at-p inline-re))
+ (save-excursion
+ (let ((end (save-excursion (outline-next-heading) (point))))
+ (forward-line)
+ (when (org-looking-at-p org-planning-line-re) (forward-line))
+ (when (and (< (point) end)
+ (not (org-looking-at-p org-property-drawer-re))
+ (save-excursion
+ (and (re-search-forward org-property-drawer-re end t)
+ (eq (org-element-type
+ (save-match-data (org-element-at-point)))
+ 'drawer))))
+ (insert (delete-and-extract-region
+ (match-beginning 0)
+ (min (1+ (match-end 0)) end)))
+ (unless (bolp) (insert "\n"))))))))))))
#+END_SRC
** Org-Gcal
)
+#+END_SRC
+** outshine (outlining) integration
+#+BEGIN_SRC emacs-lisp
+(use-package outshine
+ :ensure t
+ :hook (outline-minor-mode . outshine-hook-function)
+)
#+END_SRC
** End use-package
#+BEGIN_SRC emacs-lisp
)
#+END_SRC
* Keybindings
+** Home/End Begining/End of line
+#+BEGIN_SRC emacs-lisp
+ (global-set-key [home] 'move-beginning-of-line)
+ (global-set-key [end] 'move-end-of-line)
+#+END_SRC
** Goto line
#+BEGIN_SRC emacs-lisp
(global-unset-key "\M-g")
(setq case-fold-search t)
(setq confirm-kill-emacs (quote y-or-n-p))
(setq cperl-lazy-help-time nil)
+#+END_SRC
+** Turn on fontlock and icomplete
+#+BEGIN_SRC emacs-lisp
(global-font-lock-mode 1)
(icomplete-mode 1)
(setq log-edit-keep-buffer t)
+#+END_SRC
+** Set mail User agent
+#+BEGIN_SRC emacs-lisp
(setq mail-user-agent (quote sendmail-user-agent))
- (setq markdown-enable-math t)
- (setq markdown-follow-wiki-link-on-enter nil)
(setq mutt-alias-file-list (quote ("~/.mutt/aliases" "~/.mail_aliases")))
+#+END_SRC
+** PS Printing
+#+BEGIN_SRC emacs-lisp
(setq ps-footer-font-size (quote (8 . 10)))
(setq ps-header-font-size (quote (8 . 10)))
(setq ps-header-title-font-size (quote (10 . 10)))
(setq ps-print-footer t)
(setq ps-print-footer-frame nil)
(setq ps-print-only-one-header t)
+#+END_SRC
+** Only single spacing on sentences
+#+BEGIN_SRC emacs-lisp
(setq sentence-end "[.?!][]\"')]*\\($\\| \\| \\)[
]*")
(setq sentence-end-double-space nil)
; enable matching parenthesis
+#+END_SRC
+** Display paren mode
+#+BEGIN_SRC emacs-lisp
(show-paren-mode 1)
- (tool-bar-mode -1)
- (setq user-mail-address "don@donarmstrong.com")
- (setq vc-delete-logbuf-window nil)
- (setq vc-follow-symlinks t)
+ (setq show-paren-delay 0.2)
- ;; use git before SVN; use CVS earlier, because I have CVS
- ;; repositories inside of git directories
- (setq vc-handled-backends (quote (CVS Git RCS SVN SCCS Bzr Hg Mtn Arch)))
+#+END_SRC
+** My Username
+#+BEGIN_SRC emacs-lisp
+ (setq user-mail-address "don@donarmstrong.com")
+#+END_SRC
+** Use primary selection on unix machines
+#+BEGIN_SRC emacs-lisp
;; switch back to the old primary selection method
- (setq x-select-enable-clipboard nil)
- (setq x-select-enable-primary t)
+ (if (or (string-equal system-type "darwin")
+ (string-equal system-type "windows")
+ )
+ (progn
+ (setq select-enable-clipboard t)
+ (setq select-enable-primary nil)
+ )
+ (progn
+ (setq select-enable-clipboard nil)
+ (setq select-enable-primary t)
+ ))
; (setq mouse-drag-copy-region t)
- (fset 'perl-mode 'cperl-mode)
- ;;(load-file "cperl-mode.el")
-
;; tramp configuration
(setq tramp-use-ssh-controlmaster-options nil)