Fixed a compiling error when knetfile is not used.

[samtools.git] / bcftools / vcfutils.pl

diff --git a/bcftools/vcfutils.pl b/bcftools/vcfutils.pl
index 499a4e4ee5c8fd495898a0312ffbdc4765cab47b..3e5b7b253f10352eb37f1d49327fee23c2dbd082 100755 (executable)
--- a/bcftools/vcfutils.pl
+++ b/bcftools/vcfutils.pl
@@ -455,7 +455,7 @@ sub hapmap2vcf {
 }
 
 sub vcf2fq {
-  my %opts = (d=>3, D=>100000, Q=>10, l=>10);
+  my %opts = (d=>3, D=>100000, Q=>10, l=>5);
   getopts('d:D:Q:l:', \%opts);
   die(qq/
 Usage:   vcfutils.pl vcf2fq [options] <all-site.vcf>