move bam_nt16_nt4_table[] from bam_maqcns.c to bam_md.c

[samtools.git] / bam_md.c

diff --git a/bam_md.c b/bam_md.c
index 1fa903e8a401ea960d8ea48f6d7289b157e2eea5..a1a6d669885a278d6f330b8afb07e324cd92b310 100644 (file)
--- a/bam_md.c
+++ b/bam_md.c
@@ -9,6 +9,8 @@
 #include "kaln.h"
 #include "kprobaln.h"
 
+char bam_nt16_nt4_table[] = { 4, 0, 1, 4, 2, 4, 4, 4, 3, 4, 4, 4, 4, 4, 4, 4 };
+
 void bam_fillmd1_core(bam1_t *b, char *ref, int is_equal, int max_nm)
 {
        uint8_t *seq = bam1_seq(b);