6 Significant re-write of BamReader API as of 5/18/2009:
7 -------------------------------------------------------
8 No longer using bgzf.h/.c
9 No longer using libbambc.a library
10 No longer using STL Utilities
11 Minor changes to API syntax in opening BAM files with BamReader - see BamReader.h for details
15 ----------------------
17 See Makefile for compilation example.
20 Copy BamAlignment.h, BamReader.* and/or BamWriter.* to working directory.
21 #include "BamReader.h" and/or "BamWriter.h"
22 Use standard compile commands, including the "-lz" parameter to access zlib functionality.
23 (Note that "-L. -lbambc" are no longer necessary and WILL CAUSE PROBLEMS for compiler/linker )
26 Feel free to email me or pop by my desk with any questions, comments, suggestions, etc.